Timeline


and

06/07/06:

16:58 Changeset [3109] by howard
Changes from feedback in group have been implemented
14:37 WikiStart edited by ole
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14:36 WikiStart edited by ole
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14:36 WikiStart edited by ole
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14:35 WikiStart edited by ole
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14:35 WikiStart edited by ole
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14:34 WikiStart edited by ole
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14:34 WikiStart edited by ole
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14:30 WikiStart edited by ole
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14:30 WikiStart edited by ole
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14:29 WikiStart edited by ole
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14:21 WikiStart edited by ole
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14:21 WikiStart edited by ole
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10:56 WikiStart edited by anonymous
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10:55 WikiStart edited by anonymous
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10:52 WikiStart edited by anonymous
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10:50 Changeset [3108] by ole
Added scripts for automatically compiling planning and requirements …
10:32 WikiStart edited by anonymous
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10:21 Changeset [3107] by ole
Added installation guide to auto-update

06/06/06:

17:20 Changeset [3106] by ole
More work on parallel wollongong example
16:41 Changeset [3105] by ole
Attempt at parallelising flagstaff
16:06 Changeset [3104] by ole
Fixed missing end
15:49 Changeset [3103] by ole
Comments to userguide from Ole (meeting with Howard)
15:18 Changeset [3102] by duncan
added import ungen method
15:07 Changeset [3101] by duncan
added import_ungenerate_file method
15:07 Changeset [3100] by duncan
added import_ungenerate_file method
13:27 Changeset [3099] by howard
Amended glossary
12:29 Changeset [3098] by sexton
updates
12:25 Changeset [3097] by duncan
Fixed some tests
12:25 Changeset [3096] by ole
Allowed parallel code to access pypar directly in its directory pypar_dist
12:14 Changeset [3095] by ole
Got parallel example RunParallelSwMerimbulaMetis? to run from an arbitrary …
12:01 Changeset [3094] by sexton
fix legend and add elevation information to caption in sww2timeseries
11:58 Changeset [3093] by duncan
taking out a test for bug fixing
11:21 Changeset [3092] by sexton
few more updates
10:01 Changeset [3091] by sexton
updates
10:00 Changeset [3090] by ole
Changed mesh to neighbour_mesh

06/05/06:

17:25 Changeset [3089] by ole
Comment
17:08 Changeset [3088] by ole
nitnoi
17:07 Changeset [3087] by howard
Added material on geo_spatial data and alpha shapes to Appendix A
17:06 Changeset [3086] by ole
Updated docstrings in regard to neighbour_mesh
17:03 Changeset [3085] by ole
Moved pyvolution.mesh.py to pyvolution.test_mesh.py in order to avoid …
16:33 Changeset [3084] by ole
Made end detection in readUnGenerate more robust
15:58 Changeset [3083] by sexton
legend now
15:54 Changeset [3082] by sexton
updates
15:32 Changeset [3081] by ole
Change to location of source data on Linux
14:57 Changeset [3080] by sexton
got some pretty colours now for the report as well as getting multiple …
14:56 Changeset [3079] by sexton
small updates
14:17 Changeset [3078] by sexton
minor updates
14:06 Changeset [3077] by sexton
fixes
12:40 Changeset [3076] by howard
Added material on class Mesh to chap 4
12:27 Changeset [3075] by sexton
figure
12:21 Changeset [3074] by sexton
oops
12:16 Changeset [3073] by sexton
fixes
12:05 Ticket #81 (mesh doesn't know it has a geo_reference ) closed by ole
fixed: Fixed: See changeset:3072
12:03 Changeset [3072] by ole
Made boundary polygon return absolute UTM coordinates as per ticket:81
12:02 Changeset [3071] by ole
Prettified and added input test for dimensions
11:07 Changeset [3070] by ole
Minor bug fixes
10:57 Changeset [3069] by duncan
tidy up.
10:45 Changeset [3068] by howard
Fixed another LaTeX error
10:44 Changeset [3067] by sexton
figure
10:39 Changeset [3066] by howard
Fixed LaTeX errors
10:03 Changeset [3065] by sexton
oops
09:51 Changeset [3064] by sexton
onslow report updates
09:47 Changeset [3063] by ole
Fixed some LaTeX bugs

06/04/06:

12:22 Changeset [3062] by ole
Added FIXMES about ticket:81

06/02/06:

16:57 Changeset [3061] by howard
Corrected further small errors and added material on polygons
16:26 Changeset [3060] by duncan
moving text to the correct document
16:19 Changeset [3059] by howard
Removed reference to pmesh_to_domain_instance
15:42 Changeset [3058] by duncan
geo_ref thoughts
15:25 Changeset [3057] by duncan
adding test to show bug, ticket #81
15:24 Ticket #81 (mesh doesn't know it has a geo_reference ) created by duncan
When using pyvolution.mesh.get_boundary_polygon with georeferencing it …
15:10 Changeset [3056] by duncan
Fixing mesh_interface tests. geospatial_data.py now has …
15:07 Changeset [3055] by ole
bugger
15:03 Ticket #79 (Create mesh should check that interior regions are contained in bounding ...) closed by duncan
fixed: Actually other tests were failing since the interior polygons were outside …
15:02 Changeset [3054] by duncan
removing geo-ref from inside_polygon
13:55 Changeset [3053] by howard
Various minor corrections. Added material in Appendix A on …
13:12 Changeset [3052] by ole
Changed semantics of inside_polygon (and outside_polygon) so that one …
12:33 Changeset [3051] by duncan
checking in changes half way thru, so Ole can help
12:10 Changeset [3050] by ole
Addressed memory problem in interpolation function
11:33 Changeset [3049] by howard
Minor corrections and additions in the first 4 chapters
11:25 Changeset [3048] by duncan
Removing failing test from repository.
09:56 Changeset [3047] by duncan
seg fault problems
09:28 Changeset [3046] by ole
changed parameters

06/01/06:

18:46 Changeset [3045] by sexton
minor updates
18:12 Changeset [3044] by sexton
start on document comparing the MOST and ANUGA outputs
17:07 Changeset [3043] by ole
Got run_flagstaff going with buildings
16:32 Ticket #80 (Enable caching and verbose in create_mesh_from_regions) created by ole
It would be nice if create_mesh_from_regions behaved like most other …
16:29 Changeset [3042] by ole
Moved mesh generation so that it only takes place if create mesh is …
15:32 Changeset [3041] by jack
Added a script to quickly view hotshot format profiles, and the test …
13:27 Changeset [3040] by ole
First stab at re-running Flagstaff point (Wollongong harbour)
12:31 Changeset [3039] by jack
Roll back changes, so it'll stop segfaulting.
12:17 Ticket #79 (Create mesh should check that interior regions are contained in bounding ...) created by ole
Jane's test has been added to the beginning but because georeferencing is …
12:13 Changeset [3038] by ole
Added test for detecting interior polygons that stick outside bounding …
10:03 Changeset [3037] by ole
Updated header comments

05/31/06:

17:52 Changeset [3036] by sexton
small update to sww2timeseries
17:03 Changeset [3035] by ole
Working with Suresh at ACFR
16:41 Changeset [3034] by linda
Continued testing parallel timestepping
15:45 Changeset [3033] by linda
Further testing on time calculation in parallel computation
14:59 Ticket #77 (test_all is segmentation faulting, some of the time) closed by duncan
fixed: superseeded by ticket #78
14:41 Ticket #78 (triangle seg faulting) created by duncan
running the tests in test_triangmodule and test_triangmoduleII in the same …
14:33 Changeset [3032] by duncan
removing a test that seg faults in Windows
14:24 Changeset [3031] by duncan
more tests
14:15 Changeset [3030] by duncan
improve warning message
13:53 Changeset [3029] by ole
David's changes
10:11 Changeset [3028] by duncan
trying to fix a problem with import statements
09:49 Changeset [3027] by duncan
directory name change to avoid name conflicts.
09:35 Changeset [3026] by duncan
changing import statement back. problems in unix environment with new …
09:28 Changeset [3025] by duncan
removing triangle test from test_all for a while. I'm trying to debug …

05/30/06:

17:20 Changeset [3024] by sexton
some more words
16:38 Changeset [3023] by duncan
setting file as head
16:26 Changeset [3022] by steve
Slight problem with triangle test, had to change import command for …
16:17 Changeset [3021] by steve
updated timestep using only full cells
16:03 Changeset [3020] by duncan
sync'ing across platforms
15:19 Changeset [3019] by duncan
interpolate: adding warnings
15:15 Ticket #77 (test_all is segmentation faulting, some of the time) created by duncan
In windows. I can't reproduce it. It's coming from test_triangmodule. …
15:10 Ticket #9 (Feedback on errors) closed by duncan
fixed: A warning is given when a point is outside the mesh and if no points are …
14:48 Changeset [3018] by duncan
interpolate: Warning message if points are outside the mesh
14:32 Ticket #43 (Duplicate points in interior regions cause spurious mesh) closed by duncan
fixed: see ticket #23
14:26 Ticket #23 (bad mesh generated.) closed by duncan
fixed: All user points are turned into triangulation vertices in triangle. added …
12:22 Changeset [3017] by sexton
updates to damage section
12:08 Changeset [3016] by sexton
fixups
12:00 Changeset [3015] by sexton
including references and more updates to report words
11:57 Changeset [3014] by duncan
produce a warning if vertices without triangles are in the input.
11:27 Changeset [3013] by duncan
fixing the black screen of death bug at the mesh generation end.
11:00 Changeset [3012] by duncan
started fixing the black screen of death at the fit.py end.

05/29/06:

15:39 Changeset [3011] by ole
Stochastic plotting
14:53 Changeset [3010] by ole
beautification
14:18 Changeset [3009] by ole
Work on stochastic_study
14:09 Changeset [3008] by ole
Allowed parallel version to run sequentially
13:10 Changeset [3007] by sexton
couple of minor fixups
13:07 Changeset [3006] by ole
Work on plot_spread.py
13:04 Changeset [3005] by sexton
more updates
12:48 Changeset [3004] by sexton
updates
11:54 Changeset [3003] by duncan
typo
11:53 Changeset [3002] by duncan
typo
11:51 Changeset [3001] by duncan
fix - all files created are removed. (I hope..)
11:10 Changeset [3000] by sexton
updates
10:52 Changeset [2999] by duncan
removing generated file from repository
10:45 Changeset [2998] by sexton
test for black screen of death
10:38 Changeset [2997] by sexton
more updates
10:34 Changeset [2996] by duncan
Fix - all files created are now deleted after they have been used.
10:28 Changeset [2995] by ole
Added extra test (from real life)
10:23 Changeset [2994] by duncan
testing all tests
10:13 Changeset [2993] by duncan
moving imports around

05/28/06:

12:25 Changeset [2992] by sexton
more words on tide

05/27/06:

19:23 Changeset [2991] by sexton
updates
19:15 Changeset [2990] by sexton
update to plot in mins rather than secs for sww2timeseries
11:28 Changeset [2989] by ole
Ready to run parallel stochastic study (I hope)

05/26/06:

16:52 Changeset [2988] by ole
absolute pathname added
16:48 Changeset [2987] by ole
diagnostics
15:53 Changeset [2986] by ole
More stochastic plotting
15:46 Changeset [2985] by sexton
updates figures with fixed axis'
15:15 Changeset [2984] by ole
Parallel version of stochastic study
14:26 Changeset [2983] by sexton
updates to report
14:12 Ticket #8 (Least squares memory issue (A vs AtA)) closed by duncan
fixed
09:16 Changeset [2982] by ole
bugger!

05/25/06:

18:16 Changeset [2981] by sexton
updates to sww2timeseries
18:15 Changeset [2980] by sexton
onslow report updates
17:30 Changeset [2979] by ole
Arbitrary working dir
17:29 Changeset [2978] by sexton
testing
17:26 Changeset [2977] by sexton
testing
17:22 Changeset [2976] by ole
Option in histogram for frequency
17:21 Changeset [2975] by ole
Stochastic work
17:04 Changeset [2974] by sexton
updates
17:02 Changeset [2973] by sexton
15:42 Changeset [2972] by ole
Added create_bins and refactored pyvolution/mesh.py
15:15 Changeset [2971] by ole
More testing of histogram
12:22 Changeset [2970] by ole
use original realisation for extract_timeseries.py
12:00 Changeset [2969] by ole
Store simulation without noise separately
11:57 Changeset [2968] by ole
Work
11:47 Changeset [2967] by ole
Added function for plotting realisations of timeseries
11:45 Changeset [2966] by ole
Work on stochastic study
09:25 Changeset [2965] by sexton
update to velocity calculation

05/24/06:

18:01 Changeset [2964] by sexton
update to sww2timeseries
18:01 Changeset [2963] by sexton
incorporate new gauges into pt hedland project file
17:58 Changeset [2962] by sexton
and some more!
17:56 Changeset [2961] by sexton
forgot one
17:53 Changeset [2960] by sexton
onslow report
17:43 Changeset [2959] by ole
Fiddling with stochastic study. Realisations seemed identical?
17:33 Changeset [2958] by sexton
new gauges for Onslow
14:35 Changeset [2957] by ole
Using new interface to interpolation function and some restructuring
11:54 Changeset [2956] by nick
update to Onslow
11:39 Changeset [2955] by nick
update pt hedland geospatial_data object updated updated polygon.py to …
10:10 WikiStart edited by ole
(diff)
09:47 Changeset [2954] by nick
update pt hedland

05/23/06:

17:32 Changeset [2953] by sexton
update
17:32 Changeset [2952] by sexton
update to sww2timeseries
17:16 Changeset [2951] by sexton
update to sww2timeseries for report generation
17:16 Changeset [2950] by sexton
moving tex files to report directory for Onslow and Pt Hedland; moving all …
16:44 Changeset [2949] by ole
Updated compile and install for Opteron 64 using the Portland group …
15:59 Changeset [2948] by ole
Added area for Wollongong scenario revisit
15:31 Changeset [2947] by sexton
updates for consideration of indigeneous communities
14:46 Changeset [2946] by ole
First cut at grad proposal for validation of 2005 tsunami
14:25 Changeset [2945] by sexton
updates to smf
14:24 Changeset [2944] by sexton
updates
13:38 Changeset [2943] by sexton
graduate proposals
10:50 Changeset [2942] by duncan
changing errors thrown by geo_ref. adding tests to geospatial
09:11 Changeset [2941] by duncan
added more tests to geo_ref. It throws a different error as well now. …

05/22/06:

14:36 Changeset [2940] by nick
fixed geospatial_data more
14:15 Changeset [2939] by duncan
adding fit_to_mesh_file
10:29 Changeset [2938] by nicholas
Final organised folders of data
10:25 Changeset [2937] by sexton
additions
10:21 Changeset [2936] by sexton
additions
09:39 Changeset [2935] by nick
small changes

05/19/06:

18:20 Changeset [2934] by ole
get_version and matplotlib requirement
18:15 Changeset [2933] by ole
Fixed get_version
17:52 Changeset [2932] by ole
Modified beach example to better match the new allowance of non-zero …
17:48 Changeset [2931] by ole
Fixed open test file
17:34 Changeset [2930] by nick
update to pt hedland
17:30 Changeset [2929] by nick
added get_version_number to util.py
17:29 Changeset [2928] by nick
geospatial_data object updated so not to use dictionaries
17:11 Changeset [2927] by nicholas
final update of all relavent data
17:02 Changeset [2926] by duncan
sync'ing platforms
16:49 Changeset [2925] by nick
small changes to Scenario manual.doc and priorities.tex
16:12 Changeset [2924] by duncan
changing pyvolution code so fit_interpolate/fit.py is used.
15:23 Changeset [2923] by sexton
updates to smf doc
14:47 Changeset [2922] by sexton
trying to include location of indigeneous communities (need to check …
11:12 Changeset [2921] by sexton
including references to new polygon things

05/18/06:

18:48 Changeset [2920] by sexton
updates for reports
18:29 Changeset [2919] by sexton
updates
17:25 Changeset [2918] by sexton
updating script to add clearpage into report generation
17:23 Changeset [2917] by sexton
updating
16:58 Changeset [2916] by sexton
updates
16:54 Changeset [2915] by sexton
Onslow report updates
16:41 Changeset [2914] by sexton
tidying up
16:35 Changeset [2913] by sexton
update script using plot_polygons
16:32 Changeset [2912] by sexton
incorporate plot_polygon in polygon rather than pyvolution.util; also …
15:08 Changeset [2911] by jack
documentation update
13:39 Changeset [2910] by ole
Added -Wall to compile options to track down why metis spits the dummy on …
13:06 Changeset [2909] by linda
The parallel listed in the documentation is stored in the …
11:57 Changeset [2908] by sexton
changes to plotting polygons
11:47 Changeset [2907] by linda
Temporarly removed copy of example code from parallel directory
11:45 Changeset [2906] by linda
Made correction to the parallel report
11:01 Changeset [2905] by sexton
plotting polygon functionality added
11:00 Changeset [2904] by sexton
add plot of polygons to script
10:52 Ticket #76 (Allow job recovery after a node crash) created by Nick <nick.bartzis@…>
Store all values of all varibles every 12-24 hours to disk and develop …
10:19 Changeset [2903] by sexton
check interior_regions fall in bounding_polygon - tells you which is the …
10:01 Changeset [2902] by nick
update onslow and pt hedland

05/17/06:

17:31 Changeset [2901] by sexton
few minor changes
17:28 Changeset [2900] by sexton
few more updates to Onslow report
17:26 Changeset [2899] by sexton
updates
17:16 Changeset [2898] by sexton
updates to Onslow report
16:13 Changeset [2897] by duncan
close to finishing fit, which replaces least squares
15:26 Changeset [2896] by sexton
scripts for determining building inundation - Onslow and Pt Hedland
14:37 Changeset [2895] by ole
Changes appearance of anuga logo. Added fixme.
14:20 Changeset [2894] by ole
Added background to user guide
14:06 Changeset [2893] by ole
Wrote more text to the first example
12:16 Changeset [2892] by ole
Brought index back (why was it commented out?)
12:14 Ticket #74 (Compute values at centroids from sww file) closed by ole
fixed: Added function sww2pts in data_manager.py. See changeset:2891
12:12 Ticket #71 (Automatically obtain head revision number from subversion) closed by ole
fixed: Can be done using svn info if svn is available. Nick has started …
12:11 Changeset [2891] by ole
Added sww2pts and a test. This can be used to export values at centroids.
12:10 Changeset [2890] by duncan
added function ensure_absolute
10:45 Changeset [2889] by duncan
changes with comments
10:03 Changeset [2888] by duncan
comments

05/16/06:

17:50 Changeset [2887] by ole
prettyfied code example and minor editions
17:31 Changeset [2886] by ole
Name changes
14:47 Changeset [2885] by ole
Updated production codes in regard to replacing f.T with f.get_time()
14:42 Changeset [2884] by ole
Replaced reference to f.T with f.get_time() and retested
14:32 Changeset [2883] by ole
added get_time() to file_function
14:21 Changeset [2882] by ole
notes
14:16 Changeset [2881] by duncan
add blocking to tests
14:14 Changeset [2880] by sexton
updates
14:10 Changeset [2879] by duncan
bug fix
14:06 Changeset [2878] by sexton
intro updates
14:01 Changeset [2877] by sexton
updates for Onslow report
13:55 Changeset [2876] by sexton
updates to smf
13:35 Changeset [2875] by sexton
sydney - export results
13:32 Changeset [2874] by sexton
updates to smf document
11:47 Changeset [2873] by sexton
update test_smf
11:29 Ticket #75 (Build in okushiri validation as an automatic validation test) created by ole
The Okushiri validation checks that the model is capturing essential …
11:12 Changeset [2872] by sexton
onslow report
11:03 Changeset [2871] by sexton
updating smf document
10:35 Changeset [2870] by sexton
including damage modelling into report script

05/15/06:

17:34 Changeset [2869] by sexton
updates to slump/slide formulation and document
16:30 Changeset [2868] by ole
note
16:07 Changeset [2867] by ole
FIXME
14:26 Changeset [2866] by ole
Implemented Domain(meshfile) variant widely, updated documentation and …
14:01 Changeset [2865] by sexton
updates to smf
12:46 Changeset [2864] by ole
Added pts version of bathymetry
12:23 Changeset [2863] by nick
onslow updates

05/13/06:

18:49 Changeset [2862] by sexton
examining smf function -This line, and those below, will be ignored-- A …

05/12/06:

16:36 Changeset [2861] by howard
Further additions to section 3.1 describing how meshes are stored
16:14 Changeset [2860] by sexton
updates for reports
15:41 Changeset [2859] by ole
Removed underscores from picture
15:38 Changeset [2858] by howard
Added further descriptive material to description of the simple example in …
15:23 Changeset [2857] by sexton
report updates
15:06 Changeset [2856] by sexton
updates
13:37 Changeset [2855] by sexton
updates
12:48 Changeset [2854] by ole
Triangular mesh figure

05/11/06:

17:36 Changeset [2853] by sexton
updates to smf doc
17:17 Changeset [2852] by ole
Nailed the problem with tests failing when fixing duplicate timestep …
16:38 Changeset [2851] by ole
Another stab at removing potential for duplicate timesteps
16:10 Changeset [2850] by jack
test_parallel_sw.py now correctly shows up the problem with losing stage …
16:08 Changeset [2849] by ole
Editorial suggestions
16:01 Changeset [2848] by sexton
scripts for Pt Hedland
15:18 Changeset [2847] by jack
Corrected errors that prevented compilation.
15:15 Changeset [2846] by jack
Plugged a memory leak and improved graceful exits on errors.
15:10 Changeset [2845] by jack
Added (hopefully) safe downcasting of the long array passed to pymetis.
14:15 Changeset [2844] by sexton
updates
13:50 Changeset [2843] by sexton
updating smf document
13:26 Changeset [2842] by jack
Rolled back the patching of the metis sources. Now passes the unittest on …

05/10/06:

16:08 Changeset [2841] by duncan
cg_solve now works if b is an array

05/09/06:

12:10 Changeset [2840] by sexton
update
11:52 Changeset [2839] by sexton
updates and setting up scripts for timeseries and report generation for Pt …
10:04 Changeset [2838] by sexton
report set up for Pt Hedland

05/08/06:

17:37 Changeset [2837] by ole
Cosmetics
16:55 Changeset [2836] by sexton
updates to sww2timeseries
16:54 Changeset [2835] by sexton
updates
16:51 Changeset [2834] by sexton
updates
16:30 Changeset [2833] by ole
Updates from meeting 5 May 2006
15:27 Changeset [2832] by sexton
updates
15:21 Changeset [2831] by sexton
15:12 Changeset [2830] by sexton
updates
15:06 Changeset [2829] by sexton
14:51 Changeset [2828] by sexton
14:51 Changeset [2827] by sexton
14:46 Changeset [2826] by sexton
testing
14:45 Changeset [2825] by sexton
14:43 Changeset [2824] by sexton
new graphs
14:42 Changeset [2823] by sexton
deleting files
14:14 Changeset [2822] by sexton
testing
13:57 Changeset [2821] by sexton
testing report
13:48 Changeset [2820] by sexton
updates
13:45 Changeset [2819] by sexton
updates
13:43 Changeset [2818] by sexton
onslow report
13:39 Changeset [2817] by sexton
deleting/moving files
13:38 Changeset [2816] by sexton
deleting/moving files
13:30 Changeset [2815] by sexton
moving files within production directory; scripts for report making and …
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