[5076] | 1 | """ |
---|
| 2 | |
---|
| 3 | Script for running a breaking wave simulation of Jon Hinwoods wave tank. |
---|
| 4 | Note: this is based on the frinction_ua_flume_2006 structure. |
---|
| 5 | |
---|
| 6 | |
---|
| 7 | Duncan Gray, GA - 2007 |
---|
| 8 | |
---|
| 9 | |
---|
| 10 | |
---|
| 11 | """ |
---|
| 12 | |
---|
| 13 | |
---|
| 14 | #---------------------------------------------------------------------------- |
---|
| 15 | # Import necessary modules |
---|
| 16 | #---------------------------------------------------------------------------- |
---|
| 17 | |
---|
| 18 | # Standard modules |
---|
| 19 | import time |
---|
| 20 | from time import localtime, strftime |
---|
| 21 | import sys |
---|
| 22 | from shutil import copy |
---|
| 23 | from os import path, sep |
---|
[5370] | 24 | from os.path import dirname, join #, basename |
---|
| 25 | from Numeric import zeros, size, Float |
---|
[5076] | 26 | |
---|
| 27 | # Related major packages |
---|
| 28 | from anuga.shallow_water import Domain, Reflective_boundary, \ |
---|
| 29 | Dirichlet_boundary, Time_boundary, \ |
---|
| 30 | File_boundary, \ |
---|
| 31 | Transmissive_Momentum_Set_Stage_boundary |
---|
| 32 | from anuga.fit_interpolate.interpolate import interpolate_sww2csv |
---|
| 33 | from anuga.abstract_2d_finite_volumes.util import start_screen_catcher, \ |
---|
[5392] | 34 | file_function |
---|
| 35 | from anuga.shallow_water.data_manager import copy_code_files |
---|
[5076] | 36 | from anuga.abstract_2d_finite_volumes.generic_boundary_conditions\ |
---|
| 37 | import File_boundary_time |
---|
| 38 | |
---|
| 39 | # Scenario specific imports |
---|
| 40 | import project # Definition of file names and polygons |
---|
| 41 | import create_mesh |
---|
[5350] | 42 | from prepare_time_boundary import prepare_time_boundary |
---|
[5370] | 43 | from interp import interp |
---|
[5076] | 44 | |
---|
[5350] | 45 | |
---|
[5370] | 46 | class Elevation_function: |
---|
| 47 | def __init__(self, slope): |
---|
| 48 | self.xslope_position = [slope['xleft'][0],slope['xtoe'][0], |
---|
| 49 | slope['xbeach'][0],slope['xright'][0]] |
---|
| 50 | self.yslope_height = [slope['xleft'][1],slope['xtoe'][1], |
---|
| 51 | slope['xbeach'][1],slope['xright'][1]] |
---|
| 52 | |
---|
| 53 | def __call__(self, x,y): |
---|
| 54 | |
---|
| 55 | z = interp(self.yslope_height, self.xslope_position, x) |
---|
| 56 | return z |
---|
[5350] | 57 | |
---|
[5370] | 58 | def main(boundary_file, |
---|
[5395] | 59 | metadata_dic, |
---|
[5370] | 60 | boundary_path=None, |
---|
[5494] | 61 | friction=0.012, # planed wood. http://www.lmnoeng.com/manningn.htm |
---|
[5370] | 62 | outputdir_name=None, |
---|
[5503] | 63 | run_type=0, |
---|
[5577] | 64 | width=1.0, |
---|
| 65 | use_limits=True, |
---|
[5503] | 66 | end_tag = '_limiterD'): |
---|
[5092] | 67 | |
---|
[5350] | 68 | |
---|
[5395] | 69 | basename = 'zz_' + metadata_dic['scenario_id'] |
---|
[5503] | 70 | |
---|
[5392] | 71 | if run_type == 1: |
---|
[5447] | 72 | yieldstep = 1.0 |
---|
[5076] | 73 | finaltime = 15. |
---|
[5447] | 74 | maximum_triangle_area=0.1 |
---|
[5577] | 75 | outputdir_name += '_test' |
---|
[5395] | 76 | |
---|
[5392] | 77 | elif run_type == 2: |
---|
[5395] | 78 | yieldstep = 0.5 |
---|
| 79 | finaltime = None |
---|
[5392] | 80 | maximum_triangle_area=0.01 |
---|
[5577] | 81 | outputdir_name += '_test_long_time' |
---|
[5076] | 82 | |
---|
[5392] | 83 | elif run_type == 3: |
---|
| 84 | yieldstep = 0.1 |
---|
[5395] | 85 | finaltime = None |
---|
[5459] | 86 | maximum_triangle_area=0.01 |
---|
[5577] | 87 | #outputdir_name += '_yieldstep_0.1' |
---|
| 88 | |
---|
[5392] | 89 | elif run_type == 4: |
---|
| 90 | # this is not a test |
---|
| 91 | # Output will go to a file |
---|
| 92 | # The sww file will be interpolated |
---|
[5395] | 93 | yieldstep = 0.01 |
---|
| 94 | finaltime = None |
---|
[5410] | 95 | maximum_triangle_area=0.01 |
---|
[5594] | 96 | #outputdir_name += '_no_velocity' |
---|
[5577] | 97 | |
---|
[5405] | 98 | elif run_type == 5: |
---|
| 99 | # this is not a test |
---|
| 100 | # Output will go to a file |
---|
| 101 | # The sww file will be interpolated |
---|
| 102 | yieldstep = 0.01 |
---|
| 103 | finaltime = None |
---|
[5410] | 104 | maximum_triangle_area=0.001 |
---|
[5577] | 105 | #outputdir_name += '_good' |
---|
| 106 | |
---|
| 107 | elif run_type == 6: |
---|
| 108 | # this is not a test |
---|
| 109 | # Output will go to a file |
---|
| 110 | # The sww file will be interpolated |
---|
| 111 | yieldstep = 0.01 |
---|
| 112 | finaltime = None |
---|
| 113 | maximum_triangle_area=0.0001 |
---|
| 114 | #outputdir_name += '_good' |
---|
| 115 | |
---|
[5590] | 116 | elif run_type == 7: |
---|
| 117 | # this is not a test |
---|
| 118 | # Output will go to a file |
---|
| 119 | # The sww file will be interpolated |
---|
| 120 | yieldstep = 0.01 |
---|
| 121 | finaltime = None |
---|
| 122 | maximum_triangle_area=0.00001 |
---|
| 123 | #outputdir_name += '_good' |
---|
| 124 | |
---|
| 125 | elif run_type == 8: |
---|
| 126 | # this is not a test |
---|
| 127 | # Output will go to a file |
---|
| 128 | # The sww file will be interpolated |
---|
| 129 | yieldstep = 0.05 |
---|
| 130 | finaltime = None |
---|
| 131 | maximum_triangle_area=0.00001 |
---|
| 132 | #outputdir_name += '_good' |
---|
| 133 | |
---|
[5577] | 134 | if use_limits is True: |
---|
| 135 | outputdir_name += '_lmts' |
---|
| 136 | else: |
---|
| 137 | outputdir_name += '_nolmts' |
---|
| 138 | outputdir_name += '_wdth_' + str(width) |
---|
| 139 | outputdir_name += '_z_' + str(friction) |
---|
| 140 | outputdir_name += '_ys_' + str(yieldstep) |
---|
| 141 | outputdir_name += '_mta_' + str(maximum_triangle_area) |
---|
| 142 | outputdir_name += end_tag |
---|
| 143 | |
---|
[5395] | 144 | metadata_dic = set_z_origin_to_water_depth(metadata_dic) |
---|
[5076] | 145 | |
---|
| 146 | pro_instance = project.Project(['data','flumes','Hinwood_2008'], |
---|
[5350] | 147 | outputdir_name=outputdir_name) |
---|
[5076] | 148 | print "The output dir is", pro_instance.outputdir |
---|
| 149 | copy_code_files(pro_instance.outputdir,__file__, |
---|
| 150 | dirname(project.__file__) \ |
---|
| 151 | + sep + project.__name__+'.py') |
---|
| 152 | copy (pro_instance.codedir + 'run_dam.py', |
---|
| 153 | pro_instance.outputdir + 'run_dam.py') |
---|
| 154 | copy (pro_instance.codedir + 'create_mesh.py', |
---|
| 155 | pro_instance.outputdir + 'create_mesh.py') |
---|
[5350] | 156 | |
---|
[5395] | 157 | boundary_final_time = prepare_time_boundary(metadata_dic, |
---|
| 158 | pro_instance.raw_data_dir, |
---|
| 159 | pro_instance.boundarydir) |
---|
[5459] | 160 | #return pro_instance |
---|
[5395] | 161 | if finaltime is None: |
---|
[5494] | 162 | finaltime = boundary_final_time - 0.1 # Edge boundary problems |
---|
[5370] | 163 | # Boundary file manipulation |
---|
| 164 | if boundary_path is None: |
---|
| 165 | boundary_path = pro_instance.boundarydir |
---|
| 166 | boundary_file_path = join(boundary_path, boundary_file) |
---|
[5392] | 167 | # # Convert the boundary file, .csv to .tsm |
---|
| 168 | # try: |
---|
| 169 | # temp = open(boundary_file_path) |
---|
| 170 | # temp.close() |
---|
| 171 | # except IOError: |
---|
| 172 | # prepare_time_boundary(boundary_file_path) |
---|
[5350] | 173 | |
---|
[5076] | 174 | mesh_filename = pro_instance.meshdir + basename + '.msh' |
---|
| 175 | |
---|
| 176 | #-------------------------------------------------------------------------- |
---|
| 177 | # Copy scripts to output directory and capture screen |
---|
| 178 | # output to file |
---|
| 179 | #-------------------------------------------------------------------------- |
---|
| 180 | |
---|
| 181 | # creates copy of code in output dir |
---|
[5395] | 182 | if run_type >= 2: |
---|
| 183 | #start_screen_catcher(pro_instance.outputdir, rank, pypar.size()) |
---|
| 184 | start_screen_catcher(pro_instance.outputdir) |
---|
[5076] | 185 | |
---|
| 186 | print 'USER: ', pro_instance.user |
---|
| 187 | #------------------------------------------------------------------------- |
---|
| 188 | # Create the triangular mesh |
---|
| 189 | #------------------------------------------------------------------------- |
---|
| 190 | |
---|
| 191 | # this creates the mesh |
---|
| 192 | #gate_position = 12.0 |
---|
[5577] | 193 | create_mesh.generate(mesh_filename, metadata_dic, width=width, |
---|
[5076] | 194 | maximum_triangle_area=maximum_triangle_area) |
---|
| 195 | |
---|
| 196 | head,tail = path.split(mesh_filename) |
---|
| 197 | copy (mesh_filename, |
---|
| 198 | pro_instance.outputdir + tail ) |
---|
| 199 | #------------------------------------------------------------------------- |
---|
| 200 | # Setup computational domain |
---|
| 201 | #------------------------------------------------------------------------- |
---|
| 202 | domain = Domain(mesh_filename, use_cache = False, verbose = True) |
---|
| 203 | |
---|
| 204 | |
---|
| 205 | print 'Number of triangles = ', len(domain) |
---|
| 206 | print 'The extent is ', domain.get_extent() |
---|
| 207 | print domain.statistics() |
---|
| 208 | |
---|
| 209 | |
---|
| 210 | domain.set_name(basename) |
---|
| 211 | domain.set_datadir(pro_instance.outputdir) |
---|
| 212 | domain.set_quantities_to_be_stored(['stage', 'xmomentum', 'ymomentum']) |
---|
[5494] | 213 | domain.set_minimum_storable_height(0.0001) |
---|
[5076] | 214 | |
---|
[5577] | 215 | if use_limits is True: |
---|
| 216 | domain.set_default_order(2) # Use second order spatial scheme |
---|
| 217 | domain.set_timestepping_method('rk2') |
---|
| 218 | domain.use_edge_limiter = True |
---|
| 219 | domain.tight_slope_limiters = True |
---|
| 220 | |
---|
| 221 | domain.beta_w = 0.6 |
---|
| 222 | domain.beta_uh = 0.6 |
---|
| 223 | domain.beta_vh = 0.6 |
---|
[5494] | 224 | |
---|
| 225 | |
---|
[5076] | 226 | #------------------------------------------------------------------------- |
---|
| 227 | # Setup initial conditions |
---|
| 228 | #------------------------------------------------------------------------- |
---|
| 229 | |
---|
[5395] | 230 | domain.set_quantity('stage', 0.) #the origin is the still water level |
---|
[5370] | 231 | domain.set_quantity('friction', friction) |
---|
[5395] | 232 | elevation_function = Elevation_function(metadata_dic) |
---|
[5076] | 233 | domain.set_quantity('elevation', elevation_function) |
---|
| 234 | |
---|
| 235 | |
---|
| 236 | print 'Available boundary tags', domain.get_boundary_tags() |
---|
| 237 | |
---|
| 238 | # Create boundary function from timeseries provided in file |
---|
| 239 | #function = file_function(project.boundary_file, domain, verbose=True) |
---|
| 240 | #Bts = Transmissive_Momentum_Set_Stage_boundary(domain, function) |
---|
[5350] | 241 | try: |
---|
[5370] | 242 | function = file_function(boundary_file_path, domain, |
---|
[5350] | 243 | verbose=True) |
---|
| 244 | except IOError: |
---|
| 245 | msg = 'Run prepare_time_boundary.py. File "%s" could not be opened.'\ |
---|
| 246 | %(pro_instance.boundary_file) |
---|
| 247 | raise msg |
---|
| 248 | |
---|
[5076] | 249 | Br = Reflective_boundary(domain) |
---|
[5370] | 250 | Bd = Dirichlet_boundary([0.3,0,0]) |
---|
[5076] | 251 | Bts = Time_boundary(domain, function) |
---|
[5590] | 252 | #Bts = Transmissive_Momentum_Set_Stage_boundary(domain, function) |
---|
[5076] | 253 | domain.set_boundary( {'wall': Br, 'wave': Bts} ) |
---|
[5395] | 254 | #domain.set_boundary( {'wall': Br, 'wave': Bd} ) |
---|
[5076] | 255 | |
---|
| 256 | #------------------------------------------------------------------------- |
---|
| 257 | # Evolve system through time |
---|
| 258 | #------------------------------------------------------------------------- |
---|
| 259 | t0 = time.time() |
---|
| 260 | |
---|
[5370] | 261 | # It seems that ANUGA can't handle a starttime that is >0. |
---|
[5494] | 262 | #domain.starttime = 1.0 #!!! what was this doing? |
---|
[5078] | 263 | for t in domain.evolve(yieldstep, finaltime): |
---|
[5076] | 264 | domain.write_time() |
---|
[5078] | 265 | print 'That took %.2f seconds' %(time.time()-t0) |
---|
| 266 | print 'finished' |
---|
[5076] | 267 | |
---|
[5577] | 268 | flume_y_middle = 0.0 |
---|
[5395] | 269 | points = [] |
---|
| 270 | for gauge_x in metadata_dic['gauge_x']: |
---|
| 271 | points.append([gauge_x, flume_y_middle]) |
---|
| 272 | print "points",points |
---|
[5076] | 273 | |
---|
| 274 | |
---|
| 275 | #------------------------------------------------------------------------- |
---|
| 276 | # Calculate gauge info |
---|
| 277 | #------------------------------------------------------------------------- |
---|
| 278 | |
---|
[5447] | 279 | if run_type >= 1: |
---|
[5455] | 280 | id = metadata_dic['scenario_id'] + ".csv" |
---|
[5076] | 281 | interpolate_sww2csv(pro_instance.outputdir + basename +".sww", |
---|
| 282 | points, |
---|
[5455] | 283 | pro_instance.outputdir + "depth_" + id, |
---|
| 284 | pro_instance.outputdir + "velocity_x_" + id, |
---|
| 285 | pro_instance.outputdir + "velocity_y_" + id, |
---|
[5494] | 286 | pro_instance.outputdir + "stage_" + id, |
---|
| 287 | pro_instance.outputdir + "froude_" + id) |
---|
[5076] | 288 | |
---|
| 289 | return pro_instance |
---|
| 290 | |
---|
[5390] | 291 | def set_z_origin_to_water_depth(seabed_coords): |
---|
| 292 | offset = seabed_coords['offshore_water_depth'] |
---|
[5392] | 293 | keys = ['xleft', 'xtoe', 'xbeach', 'xright'] |
---|
| 294 | for x in keys: |
---|
[5390] | 295 | seabed_coords[x][1] -= offset |
---|
| 296 | return seabed_coords |
---|
[5076] | 297 | #------------------------------------------------------------- |
---|
| 298 | if __name__ == "__main__": |
---|
[5395] | 299 | |
---|
[5413] | 300 | from scenarios import scenarios |
---|
[5449] | 301 | from slope import gauges_for_slope |
---|
| 302 | #from plot import plot |
---|
[5426] | 303 | |
---|
[5577] | 304 | # 1 is fast and dirty |
---|
[5455] | 305 | # 4 is 0.01 |
---|
| 306 | # 5 is 0.001 |
---|
[5577] | 307 | # 6 is 0.0001 |
---|
[5590] | 308 | # 7 is 0.00001 |
---|
[5594] | 309 | # 8 is 0.00001 yieldstep = 0.05 |
---|
[5577] | 310 | |
---|
[5616] | 311 | run_type = 1 |
---|
[5664] | 312 | run_type = 4 |
---|
[5447] | 313 | #for run_data in [scenarios[5]]: |
---|
[5616] | 314 | #scenarios = scenarios[3:] |
---|
[5461] | 315 | #scenarios = [scenarios[0]] |
---|
[5577] | 316 | width = 1.0 |
---|
| 317 | width = 0.1 |
---|
[5590] | 318 | #width = 0.01 |
---|
[5447] | 319 | for run_data in scenarios: |
---|
[5455] | 320 | pro_instance = main( run_data['scenario_id'] + '_boundary.tsm' , |
---|
| 321 | run_data, |
---|
[5577] | 322 | width=width, |
---|
| 323 | run_type=run_type, |
---|
[5503] | 324 | outputdir_name=run_data['scenario_id'], |
---|
[5577] | 325 | use_limits=False, |
---|
[5664] | 326 | friction=0.0, |
---|
| 327 | end_tag='_I') |
---|
[5494] | 328 | #gauges_for_slope(pro_instance.outputdir,[run_data]) |
---|