source: anuga_work/production/australia_ph2/dampier/run_model.py @ 6971

"""Run a tsunami inundation scenario for Busselton, WA, Australia.

The scenario is defined by a triangular mesh created from project.polygon, the
elevation data is compiled into a pts file through build_elevation.py and a
simulated tsunami is generated through an sts file from build_boundary.py.

Input: sts file (build_boundary.py for respective event)
       pts file (build_elevation.py)
       information from project file
Outputs: sww file stored in project.output_run_time_dir 
The export_results_all.py and get_timeseries.py is reliant
on the outputs of this script

Ole Nielsen and Duncan Gray, GA - 2005, Jane Sexton, Nick Bartzis, GA - 2006
Ole Nielsen, Jane Sexton and Kristy Van Putten - 2008
"""

#------------------------------------------------------------------------------
# Import necessary modules
#------------------------------------------------------------------------------

# Standard modules
import os
import os.path
import time
from time import localtime, strftime, gmtime

# Related major packages
from Scientific.IO.NetCDF import NetCDFFile
import Numeric as num

from anuga.interface import create_domain_from_regions
from anuga.interface import Transmissive_stage_zero_momentum_boundary
from anuga.interface import Dirichlet_boundary
from anuga.interface import Reflective_boundary
from anuga.interface import Field_boundary
from anuga.interface import Time_boundary
from anuga.interface import file_function

from anuga.interface import create_sts_boundary
from anuga.interface import csv2building_polygons
from file_length import file_length

from anuga.shallow_water.data_manager import start_screen_catcher
from anuga.shallow_water.data_manager import copy_code_files
from anuga.shallow_water.data_manager import urs2sts
from anuga.geospatial_data.geospatial_data import Geospatial_data
from anuga.utilities.polygon import read_polygon, Polygon_function

# Application specific imports
from setup_model import project
import build_urs_boundary as bub
import prepare_timeboundary as TB

##Used to clip elevation pts file
##elevation_geospatial = Geospatial_data(file_name=project.combined_elevation+'.pts',
##                                                    verbose=True)
##elevation_geospatial = elevation_geospatial.clip(project.bounding_polygon)
##elevation = project.combined_elevation + '_' + project.model
##elevation_geospatial.export_points_file(elevation + '.pts')

#-------------------------------------------------------------------------------
# Copy scripts to time stamped output directory and capture screen
# output to file. Copy script must be before screen_catcher
#-------------------------------------------------------------------------------

copy_code_files(project.output_run, __file__, 
                os.path.join(os.path.dirname(project.__file__),
                             project.__name__+'.py'))
start_screen_catcher(project.output_run, 0, 1)

#-------------------------------------------------------------------------------
# Create the computational domain based on overall clipping polygon with
# a tagged boundary and interior regions defined in project.py along with
# resolutions (maximal area of per triangle) for each polygon
#-------------------------------------------------------------------------------

print 'Create computational domain'

# Create the STS file
print 'project.mux_data_folder=%s' % project.mux_data_folder
if not os.path.exists(project.event_sts + '.sts'):
    bub.build_urs_boundary(project.mux_input_filename, project.event_sts)

# Read in boundary from ordered sts file
event_sts = create_sts_boundary(project.event_sts)

# Reading the landward defined points, this incorporates the original clipping
# polygon minus the 100m contour
landward_boundary = read_polygon(project.landward_boundary)

# Combine sts polyline with landward points
bounding_polygon_sts = event_sts + landward_boundary

# Number of boundary segments
num_ocean_segments = len(event_sts) - 1
# Number of landward_boundary points
num_land_points = file_length(project.landward_boundary)

# Boundary tags refer to project.landward_boundary
# 4 points equals 5 segments start at N
boundary_tags={'back': range(num_ocean_segments+1,
                             num_ocean_segments+num_land_points),
               'side': [num_ocean_segments,
                        num_ocean_segments+num_land_points],
               'ocean': range(num_ocean_segments)}

# Build mesh and domain
domain = create_domain_from_regions(bounding_polygon_sts,
                                    boundary_tags=boundary_tags,
                                    maximum_triangle_area=project.bounding_maxarea,
                                    interior_regions=project.interior_regions,
                                    mesh_filename=project.meshes,
                                    use_cache=True,
                                    verbose=True)
print domain.statistics()

domain.set_name(project.scenario_name)
domain.set_datadir(project.output_run) 
domain.set_minimum_storable_height(0.01)    # Don't store depth less than 1cm

#-------------------------------------------------------------------------------
# Setup initial conditions
#-------------------------------------------------------------------------------

print 'Setup initial conditions'

# Set the initial stage in the offcoast region only
if project.land_initial_conditions:
    IC = Polygon_function(project.land_initial_conditions,
                          default=project.tide,
                          geo_reference=domain.geo_reference)
else:
    IC = 0
domain.set_quantity('stage', IC, use_cache=True, verbose=True)
domain.set_quantity('friction', project.friction) 
domain.set_quantity('elevation', 
                    filename = elevation + '.pts',
                    use_cache=True,
                    verbose=True,
                    alpha=project.alpha)

#-------------------------------------------------------------------------------
# Setup boundary conditions 
#-------------------------------------------------------------------------------

print 'Set boundary - available tags:', domain.get_boundary_tags()

# Prepare time boundary
TB.prepare_timeboundary(project.boundary_csv)
f = file_function(project.boundary_csv[:-4] + '.tms')

Br = Reflective_boundary(domain)
Bt = Transmissive_stage_zero_momentum_boundary(domain)
Bd = Dirichlet_boundary([project.tide, 0, 0])

if project.wave == 'Bf':
    Bf = Field_boundary(project.event_sts+'.sts',
                        domain, mean_stage=project.tide,
                        time_thinning=1,
                        default_boundary=Dirichlet_boundary([0, 0, 0]),
                        boundary_polygon=bounding_polygon_sts,                    
                        use_cache=True,
                        verbose=True)
    domain.set_boundary({'back': Br,
                     'side': Bt,
                     'ocean': Bf}) 
    
elif project.wave == 'Tb':
    Tb = Time_boundary(domain,f,default_boundary=Bd )

    domain.set_boundary({'back': Br,
                         'side': Bt,
                         'ocean': Tb})
else:
    print 'No wave specified in project script (Bf or Tb)'
    

#-------------------------------------------------------------------------------
# Evolve system through time
#-------------------------------------------------------------------------------

t0 = time.time()
for t in domain.evolve(yieldstep=project.yieldstep, 
                       finaltime=project.finaltime,
                       skip_initial_step=False): 
    print domain.timestepping_statistics()
    print domain.boundary_statistics(tags='ocean')

print 'Simulation took %.2f seconds' % (time.time()-t0)