1 | #!/usr/bin/env python |
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2 | |
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3 | |
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4 | import unittest |
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5 | from math import sqrt, pi |
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6 | |
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7 | |
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8 | from anuga.config import epsilon |
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9 | from general_mesh import General_mesh |
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10 | from anuga.coordinate_transforms.geo_reference import Geo_reference |
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11 | |
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12 | import numpy as num |
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13 | |
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14 | |
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15 | class Test_General_Mesh(unittest.TestCase): |
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16 | def setUp(self): |
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17 | pass |
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18 | |
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19 | def tearDown(self): |
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20 | pass |
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21 | |
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22 | |
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23 | def test_get_vertex_coordinates(self): |
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24 | from mesh_factory import rectangular |
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25 | |
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26 | #Create basic mesh |
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27 | nodes, triangles, _ = rectangular(1, 3) |
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28 | domain = General_mesh(nodes, triangles) |
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29 | |
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30 | |
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31 | assert num.allclose(domain.get_nodes(), nodes) |
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32 | |
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33 | |
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34 | M = domain.number_of_triangles |
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35 | |
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36 | V = domain.get_vertex_coordinates() |
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37 | assert V.shape[0] == 3*M |
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38 | |
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39 | for i in range(M): |
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40 | for j in range(3): |
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41 | k = triangles[i,j] #Index of vertex j in triangle i |
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42 | assert num.allclose(V[3*i+j,:], nodes[k]) |
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43 | |
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44 | def test_get_vertex_coordinates_with_geo_ref(self): |
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45 | x0 = 314036.58727982 |
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46 | y0 = 6224951.2960092 |
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47 | geo = Geo_reference(56, x0, y0) |
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48 | |
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49 | a = [0.0, 0.0] |
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50 | b = [0.0, 2.0] |
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51 | c = [2.0, 0.0] |
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52 | d = [0.0, 4.0] |
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53 | e = [2.0, 2.0] |
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54 | f = [4.0, 0.0] |
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55 | |
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56 | nodes = num.array([a, b, c, d, e, f]) |
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57 | |
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58 | nodes_absolute = geo.get_absolute(nodes) |
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59 | |
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60 | #bac, bce, ecf, dbe, daf, dae |
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61 | triangles = num.array([[1,0,2], [1,2,4], [4,2,5], [3,1,4]], num.int) |
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62 | |
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63 | domain = General_mesh(nodes, triangles, |
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64 | geo_reference = geo) |
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65 | verts = domain.get_vertex_coordinates(triangle_id=0) |
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66 | self.assert_(num.allclose(num.array([b,a,c]), verts)) |
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67 | verts = domain.get_vertex_coordinates(triangle_id=0) |
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68 | self.assert_(num.allclose(num.array([b,a,c]), verts)) |
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69 | verts = domain.get_vertex_coordinates(triangle_id=0, |
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70 | absolute=True) |
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71 | self.assert_(num.allclose(num.array([nodes_absolute[1], |
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72 | nodes_absolute[0], |
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73 | nodes_absolute[2]]), verts)) |
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74 | verts = domain.get_vertex_coordinates(triangle_id=0, |
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75 | absolute=True) |
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76 | self.assert_(num.allclose(num.array([nodes_absolute[1], |
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77 | nodes_absolute[0], |
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78 | nodes_absolute[2]]), verts)) |
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79 | |
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80 | |
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81 | |
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82 | def test_get_vertex_coordinates_triangle_id(self): |
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83 | """test_get_vertex_coordinates_triangle_id |
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84 | Test that vertices for one triangle can be returned. |
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85 | """ |
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86 | from mesh_factory import rectangular |
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87 | |
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88 | #Create basic mesh |
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89 | nodes, triangles, _ = rectangular(1, 3) |
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90 | domain = General_mesh(nodes, triangles) |
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91 | |
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92 | |
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93 | assert num.allclose(domain.get_nodes(), nodes) |
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94 | |
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95 | |
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96 | M = domain.number_of_triangles |
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97 | |
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98 | for i in range(M): |
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99 | V = domain.get_vertex_coordinates(triangle_id=i) |
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100 | assert V.shape[0] == 3 |
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101 | |
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102 | for j in range(3): |
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103 | k = triangles[i,j] #Index of vertex j in triangle i |
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104 | assert num.allclose(V[j,:], nodes[k]) |
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105 | |
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106 | |
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107 | |
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108 | |
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109 | |
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110 | def test_get_vertex_values(self): |
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111 | """Get connectivity based on triangle lists. |
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112 | """ |
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113 | from mesh_factory import rectangular |
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114 | |
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115 | #Create basic mesh |
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116 | nodes, triangles, _ = rectangular(1, 3) |
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117 | domain = General_mesh(nodes, triangles) |
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118 | |
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119 | value = [7] |
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120 | assert num.allclose(domain.get_triangles(), triangles) |
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121 | assert num.allclose(domain.get_triangles([0,4]), |
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122 | [triangles[0], triangles[4]]) |
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123 | |
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124 | |
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125 | def test_vertex_value_indices(self): |
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126 | """Check that structures are correct. |
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127 | """ |
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128 | from mesh_factory import rectangular |
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129 | |
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130 | a = [0.0, 0.0] |
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131 | b = [0.0, 2.0] |
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132 | c = [2.0, 0.0] |
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133 | d = [0.0, 4.0] |
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134 | e = [2.0, 2.0] |
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135 | f = [4.0, 0.0] |
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136 | |
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137 | nodes = num.array([a, b, c, d, e, f]) |
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138 | #bac, bce, ecf, dbe, daf, dae |
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139 | triangles = num.array([[1,0,2], [1,2,4], [4,2,5], [3,1,4]]) |
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140 | |
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141 | domain1 = General_mesh(nodes, triangles) |
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142 | |
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143 | #Create larger mesh |
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144 | nodes, triangles, _ = rectangular(3, 6) |
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145 | domain2 = General_mesh(nodes, triangles) |
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146 | |
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147 | # Test both meshes |
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148 | for domain in [domain1, domain2]: |
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149 | assert sum(domain.number_of_triangles_per_node) ==\ |
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150 | len(domain.vertex_value_indices) |
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151 | |
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152 | # Check number of triangles per node |
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153 | count = [0]*domain.number_of_nodes |
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154 | for triangle in domain.triangles: |
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155 | for i in triangle: |
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156 | count[i] += 1 |
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157 | |
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158 | #print count |
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159 | # |
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160 | assert num.allclose(count, domain.number_of_triangles_per_node) |
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161 | |
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162 | # Check indices |
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163 | current_node = 0 |
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164 | k = 0 # Track triangles touching on node |
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165 | for index in domain.vertex_value_indices: |
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166 | k += 1 |
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167 | |
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168 | triangle = index / 3 |
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169 | vertex = index % 3 |
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170 | |
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171 | assert domain.triangles[triangle, vertex] == current_node |
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172 | |
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173 | if domain.number_of_triangles_per_node[current_node] == k: |
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174 | # Move on to next node |
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175 | k = 0 |
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176 | current_node += 1 |
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177 | |
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178 | |
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179 | def test_get_triangles_and_vertices_per_node(self): |
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180 | """test_get_triangles_and_vertices_per_node - |
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181 | |
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182 | Test that tuples of triangle, vertex can be extracted |
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183 | from inverted triangles structure |
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184 | |
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185 | """ |
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186 | |
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187 | a = [0.0, 0.0] |
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188 | b = [0.0, 2.0] |
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189 | c = [2.0, 0.0] |
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190 | d = [0.0, 4.0] |
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191 | e = [2.0, 2.0] |
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192 | f = [4.0, 0.0] |
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193 | |
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194 | nodes = num.array([a, b, c, d, e, f]) |
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195 | #bac, bce, ecf, dbe, daf, dae |
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196 | triangles = num.array([[1,0,2], [1,2,4], [4,2,5], [3,1,4]]) |
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197 | |
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198 | domain = General_mesh(nodes, triangles) |
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199 | |
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200 | # One node |
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201 | L = domain.get_triangles_and_vertices_per_node(node=2) |
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202 | assert num.allclose(L[0], [0, 2]) |
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203 | assert num.allclose(L[1], [1, 1]) |
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204 | assert num.allclose(L[2], [2, 1]) |
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205 | |
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206 | # All nodes |
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207 | ALL = domain.get_triangles_and_vertices_per_node() |
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208 | assert len(ALL) == 6 |
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209 | for i, Lref in enumerate(ALL): |
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210 | L = domain.get_triangles_and_vertices_per_node(node=i) |
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211 | assert num.allclose(L, Lref) |
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212 | |
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213 | |
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214 | |
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215 | |
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216 | |
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217 | |
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218 | |
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219 | def test_areas(self): |
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220 | from mesh_factory import rectangular |
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221 | from shallow_water import Domain |
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222 | |
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223 | #Create basic mesh |
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224 | points, vertices, boundary = rectangular(1, 3) |
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225 | domain = General_mesh(points, vertices) |
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226 | |
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227 | assert domain.get_area() == 1.0 |
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228 | |
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229 | |
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230 | def test_get_unique_vertex_values(self): |
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231 | """ |
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232 | get unique_vertex based on triangle lists. |
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233 | """ |
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234 | from mesh_factory import rectangular |
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235 | from shallow_water import Domain |
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236 | |
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237 | #Create basic mesh |
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238 | points, vertices, boundary = rectangular(1, 3) |
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239 | domain = General_mesh(points, vertices) |
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240 | |
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241 | assert domain.get_unique_vertices() == [0,1,2,3,4,5,6,7] |
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242 | unique_vertices = domain.get_unique_vertices([0,1,4]) |
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243 | unique_vertices.sort() |
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244 | assert unique_vertices == [0,1,2,4,5,6,7] |
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245 | |
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246 | unique_vertices = domain.get_unique_vertices([0,4]) |
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247 | unique_vertices.sort() |
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248 | assert unique_vertices == [0,2,4,5,6,7] |
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249 | |
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250 | def test_get_node(self): |
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251 | """test_get_triangles_and_vertices_per_node - |
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252 | |
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253 | Test that tuples of triangle, vertex can be extracted |
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254 | from inverted triangles structure |
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255 | |
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256 | """ |
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257 | |
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258 | x0 = 314036.58727982 |
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259 | y0 = 6224951.2960092 |
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260 | geo = Geo_reference(56, x0, y0) |
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261 | |
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262 | a = [0.0, 0.0] |
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263 | b = [0.0, 2.0] |
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264 | c = [2.0, 0.0] |
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265 | d = [0.0, 4.0] |
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266 | e = [2.0, 2.0] |
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267 | f = [4.0, 0.0] |
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268 | |
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269 | nodes = num.array([a, b, c, d, e, f]) |
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270 | |
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271 | nodes_absolute = geo.get_absolute(nodes) |
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272 | |
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273 | #bac, bce, ecf, dbe, daf, dae |
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274 | triangles = num.array([[1,0,2], [1,2,4], [4,2,5], [3,1,4]]) |
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275 | |
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276 | domain = General_mesh(nodes, triangles, |
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277 | geo_reference = geo) |
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278 | node = domain.get_node(2) |
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279 | #self.assertEqual(c, node) |
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280 | self.failUnless(num.alltrue(c == node)) |
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281 | |
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282 | node = domain.get_node(2, absolute=True) |
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283 | #self.assertEqual(nodes_absolute[2], node) |
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284 | self.failUnless(num.alltrue(nodes_absolute[2] == node)) |
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285 | |
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286 | node = domain.get_node(2, absolute=True) |
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287 | #self.assertEqual(nodes_absolute[2], node) |
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288 | self.failUnless(num.alltrue(nodes_absolute[2] == node)) |
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289 | |
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290 | |
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291 | def test_assert_index_in_nodes(self): |
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292 | """test_assert_index_in_nodes - |
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293 | |
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294 | Test that node indices in triangles are within nodes array. |
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295 | |
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296 | """ |
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297 | |
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298 | x0 = 314036.58727982 |
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299 | y0 = 6224951.2960092 |
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300 | geo = Geo_reference(56, x0, y0) |
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301 | |
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302 | a = [0.0, 0.0] |
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303 | b = [0.0, 2.0] |
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304 | c = [2.0, 0.0] |
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305 | d = [0.0, 4.0] |
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306 | e = [2.0, 2.0] |
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307 | f = [4.0, 0.0] |
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308 | |
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309 | nodes = num.array([a, b, c, d, e, f]) |
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310 | |
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311 | nodes_absolute = geo.get_absolute(nodes) |
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312 | |
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313 | # max index is 5, use 5, expect success |
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314 | triangles = num.array([[1,5,2], [1,2,4], [4,2,5], [3,1,4]]) |
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315 | General_mesh(nodes, triangles, geo_reference=geo) |
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316 | |
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317 | # max index is 5, use 6, expect assert failure |
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318 | triangles = num.array([[1,6,2], [1,2,4], [4,2,5], [3,1,4]]) |
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319 | self.failUnlessRaises(AssertionError, General_mesh, |
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320 | nodes, triangles, geo_reference=geo) |
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321 | |
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322 | # max index is 5, use 10, expect assert failure |
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323 | triangles = num.array([[1,10,2], [1,2,4], [4,2,5], [3,1,4]]) |
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324 | self.failUnlessRaises(AssertionError, General_mesh, |
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325 | nodes, triangles, geo_reference=geo) |
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326 | |
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327 | |
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328 | |
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329 | #------------------------------------------------------------- |
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330 | if __name__ == "__main__": |
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331 | suite = unittest.makeSuite(Test_General_Mesh,'test') |
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332 | #suite = unittest.makeSuite(Test_General_Mesh,'test_get_node') |
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333 | runner = unittest.TextTestRunner() |
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334 | runner.run(suite) |
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335 | |
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