#!/usr/bin/env python import unittest from math import sqrt, pi from anuga.config import epsilon from general_mesh import General_mesh from anuga.coordinate_transforms.geo_reference import Geo_reference import numpy as num class Test_General_Mesh(unittest.TestCase): def setUp(self): pass def tearDown(self): pass def test_get_vertex_coordinates(self): from mesh_factory import rectangular #Create basic mesh nodes, triangles, _ = rectangular(1, 3) domain = General_mesh(nodes, triangles) assert num.allclose(domain.get_nodes(), nodes) M = domain.number_of_triangles V = domain.get_vertex_coordinates() assert V.shape[0] == 3*M for i in range(M): for j in range(3): k = triangles[i,j] #Index of vertex j in triangle i assert num.allclose(V[3*i+j,:], nodes[k]) def test_get_vertex_coordinates_with_geo_ref(self): x0 = 314036.58727982 y0 = 6224951.2960092 geo = Geo_reference(56, x0, y0) a = [0.0, 0.0] b = [0.0, 2.0] c = [2.0, 0.0] d = [0.0, 4.0] e = [2.0, 2.0] f = [4.0, 0.0] nodes = num.array([a, b, c, d, e, f]) nodes_absolute = geo.get_absolute(nodes) # bac, bce, ecf, dbe triangles = num.array([[1,0,2], [1,2,4], [4,2,5], [3,1,4]], num.int) domain = General_mesh(nodes, triangles, geo_reference=geo) verts = domain.get_vertex_coordinates(triangle_id=0) # bac msg = ("num.array([b,a,c])=\n%s\nshould be close to 'verts'=\n%s" % (str(num.array([b,a,c])), str(verts))) self.failUnless(num.allclose(num.array([b,a,c]), verts), msg) verts = domain.get_vertex_coordinates(triangle_id=0) msg = ("num.array([b,a,c])=\n%s\nshould be close to 'verts'=\n%s" % (str(num.array([b,a,c])), str(verts))) self.assert_(num.allclose(num.array([b,a,c]), verts), msg) verts = domain.get_vertex_coordinates(triangle_id=0, absolute=True) msg = ("num.array([...])=\n%s\nshould be close to 'verts'=\n%s" % (str(num.array([nodes_absolute[1], nodes_absolute[0], nodes_absolute[2]])), str(verts))) self.assert_(num.allclose(num.array([nodes_absolute[1], nodes_absolute[0], nodes_absolute[2]]), verts), msg) verts = domain.get_vertex_coordinates(triangle_id=0, absolute=True) msg = ("num.array([...])=\n%s\nshould be close to 'verts'=\n%s" % (str(num.array([nodes_absolute[1], nodes_absolute[0], nodes_absolute[2]])), str(verts))) self.assert_(num.allclose(num.array([nodes_absolute[1], nodes_absolute[0], nodes_absolute[2]]), verts), msg) def test_get_vertex_coordinates_triangle_id(self): """test_get_vertex_coordinates_triangle_id Test that vertices for one triangle can be returned. """ from mesh_factory import rectangular #Create basic mesh nodes, triangles, _ = rectangular(1, 3) domain = General_mesh(nodes, triangles) assert num.allclose(domain.get_nodes(), nodes) M = domain.number_of_triangles for i in range(M): V = domain.get_vertex_coordinates(triangle_id=i) assert V.shape[0] == 3 for j in range(3): k = triangles[i,j] #Index of vertex j in triangle i assert num.allclose(V[j,:], nodes[k]) def test_get_vertex_values(self): """Get connectivity based on triangle lists. """ from mesh_factory import rectangular #Create basic mesh nodes, triangles, _ = rectangular(1, 3) domain = General_mesh(nodes, triangles) # value = [7] msg = ("domain.get_triangles()=\n%s\nshould be the same as " "'triangles'=\n%s" % (str(domain.get_triangles()), str(triangles))) assert num.allclose(domain.get_triangles(), triangles), msg msg = ("domain.get_triangles([0,4])=\n%s\nshould be the same as " "'[triangles[0], triangles[4]]' which is\n%s" % (str(domain.get_triangles([0,4])), str([triangles[0], triangles[4]]))) assert num.allclose(domain.get_triangles([0,4]), [triangles[0], triangles[4]]), msg def test_vertex_value_indices(self): """Check that structures are correct. """ from mesh_factory import rectangular a = [0.0, 0.0] b = [0.0, 2.0] c = [2.0, 0.0] d = [0.0, 4.0] e = [2.0, 2.0] f = [4.0, 0.0] nodes = num.array([a, b, c, d, e, f]) #bac, bce, ecf, dbe, daf, dae triangles = num.array([[1,0,2], [1,2,4], [4,2,5], [3,1,4]]) domain1 = General_mesh(nodes, triangles) #Create larger mesh nodes, triangles, _ = rectangular(3, 6) domain2 = General_mesh(nodes, triangles) # Test both meshes for domain in [domain1, domain2]: assert sum(domain.number_of_triangles_per_node) ==\ len(domain.vertex_value_indices) # Check number of triangles per node count = [0]*domain.number_of_nodes for triangle in domain.triangles: for i in triangle: count[i] += 1 #print count # assert num.allclose(count, domain.number_of_triangles_per_node) # Check indices current_node = 0 k = 0 # Track triangles touching on node for index in domain.vertex_value_indices: k += 1 triangle = index / 3 vertex = index % 3 assert domain.triangles[triangle, vertex] == current_node if domain.number_of_triangles_per_node[current_node] == k: # Move on to next node k = 0 current_node += 1 def test_get_triangles_and_vertices_per_node(self): """test_get_triangles_and_vertices_per_node - Test that tuples of triangle, vertex can be extracted from inverted triangles structure """ a = [0.0, 0.0] b = [0.0, 2.0] c = [2.0, 0.0] d = [0.0, 4.0] e = [2.0, 2.0] f = [4.0, 0.0] nodes = num.array([a, b, c, d, e, f]) #bac, bce, ecf, dbe, daf, dae triangles = num.array([[1,0,2], [1,2,4], [4,2,5], [3,1,4]]) domain = General_mesh(nodes, triangles) # One node L = domain.get_triangles_and_vertices_per_node(node=2) assert num.allclose(L[0], [0, 2]) assert num.allclose(L[1], [1, 1]) assert num.allclose(L[2], [2, 1]) # All nodes ALL = domain.get_triangles_and_vertices_per_node() assert len(ALL) == 6 for i, Lref in enumerate(ALL): L = domain.get_triangles_and_vertices_per_node(node=i) assert num.allclose(L, Lref) def test_areas(self): from mesh_factory import rectangular from shallow_water import Domain #Create basic mesh points, vertices, boundary = rectangular(1, 3) domain = General_mesh(points, vertices) assert domain.get_area() == 1.0 def test_get_unique_vertex_values(self): """ get unique_vertex based on triangle lists. """ from mesh_factory import rectangular from shallow_water import Domain #Create basic mesh points, vertices, boundary = rectangular(1, 3) domain = General_mesh(points, vertices) assert domain.get_unique_vertices() == [0,1,2,3,4,5,6,7] unique_vertices = domain.get_unique_vertices([0,1,4]) unique_vertices.sort() assert unique_vertices == [0,1,2,4,5,6,7] unique_vertices = domain.get_unique_vertices([0,4]) unique_vertices.sort() assert unique_vertices == [0,2,4,5,6,7] def test_get_node(self): """test_get_triangles_and_vertices_per_node - Test that tuples of triangle, vertex can be extracted from inverted triangles structure """ x0 = 314036.58727982 y0 = 6224951.2960092 geo = Geo_reference(56, x0, y0) a = [0.0, 0.0] b = [0.0, 2.0] c = [2.0, 0.0] d = [0.0, 4.0] e = [2.0, 2.0] f = [4.0, 0.0] nodes = num.array([a, b, c, d, e, f]) nodes_absolute = geo.get_absolute(nodes) # bac, bce, ecf, dbe triangles = num.array([[1,0,2], [1,2,4], [4,2,5], [3,1,4]]) domain = General_mesh(nodes, triangles, geo_reference = geo) node = domain.get_node(2) msg = ('\nc=%s\nnode=%s' % (str(c), str(node))) self.failUnless(num.alltrue(c == node), msg) # repeat get_node(), see if result same node = domain.get_node(2) msg = ('\nc=%s\nnode=%s' % (str(c), str(node))) self.failUnless(num.alltrue(c == node), msg) node = domain.get_node(2, absolute=True) msg = ('\nnodes_absolute[2]=%s\nnode=%s' % (str(nodes_absolute[2]), str(node))) self.failUnless(num.alltrue(nodes_absolute[2] == node), msg) # repeat get_node(2, absolute=True), see if result same node = domain.get_node(2, absolute=True) msg = ('\nnodes_absolute[2]=%s\nnode=%s' % (str(nodes_absolute[2]), str(node))) self.failUnless(num.alltrue(nodes_absolute[2] == node), msg) def test_assert_index_in_nodes(self): """test_assert_index_in_nodes - Test that node indices in triangles are within nodes array. """ x0 = 314036.58727982 y0 = 6224951.2960092 geo = Geo_reference(56, x0, y0) a = [0.0, 0.0] b = [0.0, 2.0] c = [2.0, 0.0] d = [0.0, 4.0] e = [2.0, 2.0] f = [4.0, 0.0] nodes = num.array([a, b, c, d, e, f]) nodes_absolute = geo.get_absolute(nodes) # max index is 5, use 5, expect success triangles = num.array([[1,5,2], [1,2,4], [4,2,5], [3,1,4]]) General_mesh(nodes, triangles, geo_reference=geo) # max index is 5, use 6, expect assert failure triangles = num.array([[1,6,2], [1,2,4], [4,2,5], [3,1,4]]) self.failUnlessRaises(AssertionError, General_mesh, nodes, triangles, geo_reference=geo) # max index is 5, use 10, expect assert failure triangles = num.array([[1,10,2], [1,2,4], [4,2,5], [3,1,4]]) self.failUnlessRaises(AssertionError, General_mesh, nodes, triangles, geo_reference=geo) def test_raw_change_points_geo_ref(self): x0 = 1000.0 y0 = 2000.0 geo = Geo_reference(56, x0, y0) #------------------------------------------------------------- if __name__ == "__main__": suite = unittest.makeSuite(Test_General_Mesh, 'test') runner = unittest.TextTestRunner() runner.run(suite)