1 | /* |
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2 | * Copyright 1997, Regents of the University of Minnesota |
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3 | * |
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4 | * pmetis.c |
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5 | * |
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6 | * This file contains the top level routines for the multilevel recursive |
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7 | * bisection algorithm PMETIS. |
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8 | * |
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9 | * Started 7/24/97 |
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10 | * George |
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11 | * |
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12 | * $Id: pmetis.c,v 1.1 1998/11/27 17:59:28 karypis Exp $ |
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13 | * |
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14 | */ |
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15 | |
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16 | #include <metis.h> |
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17 | |
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18 | |
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19 | /************************************************************************* |
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20 | * This function is the entry point for PMETIS |
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21 | **************************************************************************/ |
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22 | void METIS_PartGraphRecursive(int *nvtxs, idxtype *xadj, idxtype *adjncy, idxtype *vwgt, |
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23 | idxtype *adjwgt, int *wgtflag, int *numflag, int *nparts, |
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24 | int *options, int *edgecut, idxtype *part) |
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25 | { |
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26 | int i; |
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27 | float *tpwgts; |
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28 | |
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29 | tpwgts = fmalloc(*nparts, "KMETIS: tpwgts"); |
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30 | for (i=0; i<*nparts; i++) |
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31 | tpwgts[i] = 1.0/(1.0*(*nparts)); |
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32 | |
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33 | METIS_WPartGraphRecursive(nvtxs, xadj, adjncy, vwgt, adjwgt, wgtflag, numflag, nparts, |
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34 | tpwgts, options, edgecut, part); |
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35 | |
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36 | free(tpwgts); |
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37 | } |
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38 | |
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39 | |
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40 | |
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41 | /************************************************************************* |
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42 | * This function is the entry point for PWMETIS that accepts exact weights |
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43 | * for the target partitions |
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44 | **************************************************************************/ |
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45 | void METIS_WPartGraphRecursive(int *nvtxs, idxtype *xadj, idxtype *adjncy, idxtype *vwgt, |
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46 | idxtype *adjwgt, int *wgtflag, int *numflag, int *nparts, |
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47 | float *tpwgts, int *options, int *edgecut, idxtype *part) |
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48 | { |
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49 | int i, j; |
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50 | GraphType graph; |
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51 | CtrlType ctrl; |
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52 | float *mytpwgts; |
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53 | |
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54 | if (*numflag == 1) |
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55 | Change2CNumbering(*nvtxs, xadj, adjncy); |
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56 | |
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57 | SetUpGraph(&graph, OP_PMETIS, *nvtxs, 1, xadj, adjncy, vwgt, adjwgt, *wgtflag); |
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58 | |
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59 | if (options[0] == 0) { /* Use the default parameters */ |
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60 | ctrl.CType = PMETIS_CTYPE; |
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61 | ctrl.IType = PMETIS_ITYPE; |
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62 | ctrl.RType = PMETIS_RTYPE; |
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63 | ctrl.dbglvl = PMETIS_DBGLVL; |
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64 | } |
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65 | else { |
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66 | ctrl.CType = options[OPTION_CTYPE]; |
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67 | ctrl.IType = options[OPTION_ITYPE]; |
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68 | ctrl.RType = options[OPTION_RTYPE]; |
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69 | ctrl.dbglvl = options[OPTION_DBGLVL]; |
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70 | } |
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71 | ctrl.optype = OP_PMETIS; |
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72 | ctrl.CoarsenTo = 20; |
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73 | ctrl.maxvwgt = 1.5*(idxsum(*nvtxs, graph.vwgt)/ctrl.CoarsenTo); |
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74 | |
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75 | mytpwgts = fmalloc(*nparts, "PWMETIS: mytpwgts"); |
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76 | for (i=0; i<*nparts; i++) |
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77 | mytpwgts[i] = tpwgts[i]; |
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78 | |
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79 | InitRandom(-1); |
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80 | |
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81 | AllocateWorkSpace(&ctrl, &graph, *nparts); |
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82 | |
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83 | IFSET(ctrl.dbglvl, DBG_TIME, InitTimers(&ctrl)); |
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84 | IFSET(ctrl.dbglvl, DBG_TIME, starttimer(ctrl.TotalTmr)); |
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85 | |
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86 | *edgecut = MlevelRecursiveBisection(&ctrl, &graph, *nparts, part, mytpwgts, 1.000, 0); |
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87 | |
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88 | IFSET(ctrl.dbglvl, DBG_TIME, stoptimer(ctrl.TotalTmr)); |
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89 | IFSET(ctrl.dbglvl, DBG_TIME, PrintTimers(&ctrl)); |
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90 | |
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91 | FreeWorkSpace(&ctrl, &graph); |
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92 | free(mytpwgts); |
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93 | |
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94 | if (*numflag == 1) |
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95 | Change2FNumbering(*nvtxs, xadj, adjncy, part); |
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96 | } |
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97 | |
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98 | |
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99 | |
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100 | /************************************************************************* |
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101 | * This function takes a graph and produces a bisection of it |
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102 | **************************************************************************/ |
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103 | int MlevelRecursiveBisection(CtrlType *ctrl, GraphType *graph, int nparts, idxtype *part, float *tpwgts, float ubfactor, int fpart) |
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104 | { |
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105 | int i, j, nvtxs, cut, tvwgt, tpwgts2[2]; |
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106 | idxtype *label, *where; |
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107 | GraphType lgraph, rgraph; |
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108 | float wsum; |
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109 | |
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110 | nvtxs = graph->nvtxs; |
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111 | if (nvtxs == 0) { |
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112 | printf("\t***Cannot bisect a graph with 0 vertices!\n\t***You are trying to partition a graph into too many parts!\n"); |
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113 | return 0; |
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114 | } |
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115 | |
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116 | /* Determine the weights of the partitions */ |
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117 | tvwgt = idxsum(nvtxs, graph->vwgt); |
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118 | tpwgts2[0] = tvwgt*ssum(nparts/2, tpwgts); |
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119 | tpwgts2[1] = tvwgt-tpwgts2[0]; |
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120 | |
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121 | MlevelEdgeBisection(ctrl, graph, tpwgts2, ubfactor); |
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122 | cut = graph->mincut; |
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123 | |
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124 | /* printf("%5d %5d %5d [%5d %f]\n", tpwgts2[0], tpwgts2[1], cut, tvwgt, ssum(nparts/2, tpwgts));*/ |
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125 | |
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126 | label = graph->label; |
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127 | where = graph->where; |
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128 | for (i=0; i<nvtxs; i++) |
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129 | part[label[i]] = where[i] + fpart; |
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130 | |
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131 | if (nparts > 2) { |
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132 | SplitGraphPart(ctrl, graph, &lgraph, &rgraph); |
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133 | /* printf("%d %d\n", lgraph.nvtxs, rgraph.nvtxs); */ |
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134 | } |
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135 | |
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136 | |
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137 | /* Free the memory of the top level graph */ |
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138 | GKfree(&graph->gdata, &graph->rdata, &graph->label, LTERM); |
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139 | |
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140 | /* Scale the fractions in the tpwgts according to the true weight */ |
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141 | wsum = ssum(nparts/2, tpwgts); |
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142 | sscale(nparts/2, 1.0/wsum, tpwgts); |
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143 | sscale(nparts-nparts/2, 1.0/(1.0-wsum), tpwgts+nparts/2); |
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144 | /* |
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145 | for (i=0; i<nparts; i++) |
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146 | printf("%5.3f ", tpwgts[i]); |
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147 | printf("[%5.3f]\n", wsum); |
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148 | */ |
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149 | |
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150 | /* Do the recursive call */ |
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151 | if (nparts > 3) { |
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152 | cut += MlevelRecursiveBisection(ctrl, &lgraph, nparts/2, part, tpwgts, ubfactor, fpart); |
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153 | cut += MlevelRecursiveBisection(ctrl, &rgraph, nparts-nparts/2, part, tpwgts+nparts/2, ubfactor, fpart+nparts/2); |
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154 | } |
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155 | else if (nparts == 3) { |
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156 | cut += MlevelRecursiveBisection(ctrl, &rgraph, nparts-nparts/2, part, tpwgts+nparts/2, ubfactor, fpart+nparts/2); |
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157 | GKfree(&lgraph.gdata, &lgraph.label, LTERM); |
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158 | } |
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159 | |
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160 | return cut; |
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161 | |
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162 | } |
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163 | |
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164 | |
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165 | /************************************************************************* |
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166 | * This function performs multilevel bisection |
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167 | **************************************************************************/ |
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168 | void MlevelEdgeBisection(CtrlType *ctrl, GraphType *graph, int *tpwgts, float ubfactor) |
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169 | { |
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170 | GraphType *cgraph; |
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171 | |
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172 | cgraph = Coarsen2Way(ctrl, graph); |
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173 | |
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174 | Init2WayPartition(ctrl, cgraph, tpwgts, ubfactor); |
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175 | |
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176 | Refine2Way(ctrl, graph, cgraph, tpwgts, ubfactor); |
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177 | |
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178 | /* |
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179 | IsConnectedSubdomain(ctrl, graph, 0); |
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180 | IsConnectedSubdomain(ctrl, graph, 1); |
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181 | */ |
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182 | } |
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183 | |
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184 | |
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185 | |
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186 | |
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187 | /************************************************************************* |
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188 | * This function takes a graph and a bisection and splits it into two graphs. |
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189 | **************************************************************************/ |
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190 | void SplitGraphPart(CtrlType *ctrl, GraphType *graph, GraphType *lgraph, GraphType *rgraph) |
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191 | { |
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192 | int i, j, k, kk, l, istart, iend, mypart, nvtxs, ncon, snvtxs[2], snedges[2], sum; |
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193 | idxtype *xadj, *vwgt, *adjncy, *adjwgt, *adjwgtsum, *label, *where, *bndptr; |
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194 | idxtype *sxadj[2], *svwgt[2], *sadjncy[2], *sadjwgt[2], *sadjwgtsum[2], *slabel[2]; |
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195 | idxtype *rename; |
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196 | idxtype *auxadjncy, *auxadjwgt; |
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197 | float *nvwgt, *snvwgt[2], *npwgts; |
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198 | |
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199 | |
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200 | IFSET(ctrl->dbglvl, DBG_TIME, starttimer(ctrl->SplitTmr)); |
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201 | |
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202 | nvtxs = graph->nvtxs; |
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203 | ncon = graph->ncon; |
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204 | xadj = graph->xadj; |
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205 | vwgt = graph->vwgt; |
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206 | nvwgt = graph->nvwgt; |
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207 | adjncy = graph->adjncy; |
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208 | adjwgt = graph->adjwgt; |
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209 | adjwgtsum = graph->adjwgtsum; |
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210 | label = graph->label; |
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211 | where = graph->where; |
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212 | bndptr = graph->bndptr; |
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213 | npwgts = graph->npwgts; |
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214 | |
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215 | ASSERT(bndptr != NULL); |
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216 | |
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217 | rename = idxwspacemalloc(ctrl, nvtxs); |
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218 | |
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219 | snvtxs[0] = snvtxs[1] = snedges[0] = snedges[1] = 0; |
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220 | for (i=0; i<nvtxs; i++) { |
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221 | k = where[i]; |
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222 | rename[i] = snvtxs[k]++; |
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223 | snedges[k] += xadj[i+1]-xadj[i]; |
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224 | } |
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225 | |
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226 | SetUpSplitGraph(graph, lgraph, snvtxs[0], snedges[0]); |
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227 | sxadj[0] = lgraph->xadj; |
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228 | svwgt[0] = lgraph->vwgt; |
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229 | snvwgt[0] = lgraph->nvwgt; |
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230 | sadjwgtsum[0] = lgraph->adjwgtsum; |
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231 | sadjncy[0] = lgraph->adjncy; |
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232 | sadjwgt[0] = lgraph->adjwgt; |
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233 | slabel[0] = lgraph->label; |
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234 | |
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235 | SetUpSplitGraph(graph, rgraph, snvtxs[1], snedges[1]); |
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236 | sxadj[1] = rgraph->xadj; |
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237 | svwgt[1] = rgraph->vwgt; |
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238 | snvwgt[1] = rgraph->nvwgt; |
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239 | sadjwgtsum[1] = rgraph->adjwgtsum; |
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240 | sadjncy[1] = rgraph->adjncy; |
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241 | sadjwgt[1] = rgraph->adjwgt; |
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242 | slabel[1] = rgraph->label; |
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243 | |
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244 | snvtxs[0] = snvtxs[1] = snedges[0] = snedges[1] = 0; |
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245 | sxadj[0][0] = sxadj[1][0] = 0; |
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246 | for (i=0; i<nvtxs; i++) { |
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247 | mypart = where[i]; |
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248 | sum = adjwgtsum[i]; |
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249 | |
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250 | istart = xadj[i]; |
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251 | iend = xadj[i+1]; |
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252 | if (bndptr[i] == -1) { /* This is an interior vertex */ |
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253 | auxadjncy = sadjncy[mypart] + snedges[mypart] - istart; |
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254 | auxadjwgt = sadjwgt[mypart] + snedges[mypart] - istart; |
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255 | for(j=istart; j<iend; j++) { |
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256 | auxadjncy[j] = adjncy[j]; |
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257 | auxadjwgt[j] = adjwgt[j]; |
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258 | } |
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259 | snedges[mypart] += iend-istart; |
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260 | } |
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261 | else { |
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262 | auxadjncy = sadjncy[mypart]; |
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263 | auxadjwgt = sadjwgt[mypart]; |
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264 | l = snedges[mypart]; |
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265 | for (j=istart; j<iend; j++) { |
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266 | k = adjncy[j]; |
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267 | if (where[k] == mypart) { |
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268 | auxadjncy[l] = k; |
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269 | auxadjwgt[l++] = adjwgt[j]; |
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270 | } |
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271 | else { |
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272 | sum -= adjwgt[j]; |
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273 | } |
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274 | } |
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275 | snedges[mypart] = l; |
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276 | } |
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277 | |
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278 | if (ncon == 1) |
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279 | svwgt[mypart][snvtxs[mypart]] = vwgt[i]; |
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280 | else { |
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281 | for (kk=0; kk<ncon; kk++) |
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282 | snvwgt[mypart][snvtxs[mypart]*ncon+kk] = nvwgt[i*ncon+kk]/npwgts[mypart*ncon+kk]; |
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283 | } |
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284 | |
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285 | sadjwgtsum[mypart][snvtxs[mypart]] = sum; |
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286 | slabel[mypart][snvtxs[mypart]] = label[i]; |
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287 | sxadj[mypart][++snvtxs[mypart]] = snedges[mypart]; |
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288 | } |
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289 | |
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290 | for (mypart=0; mypart<2; mypart++) { |
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291 | iend = sxadj[mypart][snvtxs[mypart]]; |
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292 | auxadjncy = sadjncy[mypart]; |
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293 | for (i=0; i<iend; i++) |
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294 | auxadjncy[i] = rename[auxadjncy[i]]; |
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295 | } |
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296 | |
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297 | lgraph->nedges = snedges[0]; |
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298 | rgraph->nedges = snedges[1]; |
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299 | |
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300 | IFSET(ctrl->dbglvl, DBG_TIME, stoptimer(ctrl->SplitTmr)); |
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301 | |
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302 | idxwspacefree(ctrl, nvtxs); |
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303 | } |
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304 | |
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305 | |
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306 | /************************************************************************* |
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307 | * Setup the various arrays for the splitted graph |
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308 | **************************************************************************/ |
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309 | void SetUpSplitGraph(GraphType *graph, GraphType *sgraph, int snvtxs, int snedges) |
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310 | { |
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311 | InitGraph(sgraph); |
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312 | sgraph->nvtxs = snvtxs; |
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313 | sgraph->nedges = snedges; |
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314 | sgraph->ncon = graph->ncon; |
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315 | |
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316 | /* Allocate memory for the splitted graph */ |
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317 | if (graph->ncon == 1) { |
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318 | sgraph->gdata = idxmalloc(4*snvtxs+1 + 2*snedges, "SetUpSplitGraph: gdata"); |
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319 | |
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320 | sgraph->xadj = sgraph->gdata; |
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321 | sgraph->vwgt = sgraph->gdata + snvtxs+1; |
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322 | sgraph->adjwgtsum = sgraph->gdata + 2*snvtxs+1; |
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323 | sgraph->cmap = sgraph->gdata + 3*snvtxs+1; |
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324 | sgraph->adjncy = sgraph->gdata + 4*snvtxs+1; |
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325 | sgraph->adjwgt = sgraph->gdata + 4*snvtxs+1 + snedges; |
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326 | } |
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327 | else { |
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328 | sgraph->gdata = idxmalloc(3*snvtxs+1 + 2*snedges, "SetUpSplitGraph: gdata"); |
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329 | |
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330 | sgraph->xadj = sgraph->gdata; |
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331 | sgraph->adjwgtsum = sgraph->gdata + snvtxs+1; |
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332 | sgraph->cmap = sgraph->gdata + 2*snvtxs+1; |
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333 | sgraph->adjncy = sgraph->gdata + 3*snvtxs+1; |
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334 | sgraph->adjwgt = sgraph->gdata + 3*snvtxs+1 + snedges; |
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335 | |
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336 | sgraph->nvwgt = fmalloc(graph->ncon*snvtxs, "SetUpSplitGraph: nvwgt"); |
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337 | } |
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338 | |
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339 | sgraph->label = idxmalloc(snvtxs, "SetUpSplitGraph: sgraph->label"); |
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340 | } |
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341 | |
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