1 | def pmesh_to_domain(fileName, tags = None, setting_function = None): |
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2 | import sys |
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3 | from config import pmesh_filename |
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4 | sys.path.append(pmesh_filename) |
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5 | from load_mesh.loadASCII import import_trianglulation |
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6 | |
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7 | try: |
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8 | meshdic = import_trianglulation(fileName) |
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9 | except IOError, e: |
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10 | msg = 'Could not open file %s ' %fileName |
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11 | raise IOError, msg |
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12 | |
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13 | |
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14 | domain = pmesh_dictionary_to_domain(meshdic, |
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15 | setting_function = setting_function) |
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16 | if tags: |
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17 | domain.set_boundary(tags) |
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18 | |
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19 | return domain |
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20 | |
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21 | |
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22 | |
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23 | def pmesh_dictionary_to_domain(meshdic, setting_function = None): |
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24 | """ |
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25 | convert a pmesh dictionary to a list of Volumes. |
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26 | Also, return a list of triangles which have boundary tags |
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27 | meshdic structure; |
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28 | generated point list: [(x1,y1),(x2,y2),...] (Tuples of doubles) |
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29 | generated point attribute list:[(P1att1,P1attt2, ...),(P2att1,P2attt2,...),...] |
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30 | generated segment list: [(point1,point2),(p3,p4),...] (Tuples of integers) |
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31 | generated segment marker list: [S1Marker, S2Marker, ...] (list of ints) |
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32 | triangle list: [(point1,point2, point3),(p5,p4, p1),...] (Tuples of integers) |
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33 | triangle neighbor list: [(triangle1,triangle2, triangle3),(t5,t4, t1),...] (Tuples of integers) -1 means there's no triangle neighbor |
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34 | triangle attribute list: [T1att, T2att, ...] (list of floats) |
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35 | """ |
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36 | |
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37 | vertex_coordinates = meshdic['generatedpointlist'] |
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38 | volumes = meshdic['generatedtrianglelist'] |
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39 | |
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40 | #if setting_function: |
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41 | # if not type(setting_function) is ListType: |
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42 | # setting_function = [setting_function] |
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43 | # for funct in setting_function: |
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44 | # meshdic = funct(meshdic, vertices = mesh_vertices, |
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45 | # volumes = volumes) |
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46 | |
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47 | marker_dict = pmesh_dict_to_marker_dict(volumes, meshdic, |
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48 | vertex_coordinates) |
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49 | |
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50 | return vertex_coordinates, volumes, marker_dict |
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51 | |
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52 | |
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53 | |
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54 | |
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55 | #FIXME: The issue is whether this format should be stored in the tsh file |
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56 | #instead of having to be created here? |
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57 | |
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58 | #FIXME: Another issue is that the tsh file stores consecutive |
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59 | #indices explicitly. This is really redundant. |
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60 | #Suggest looking at obj and our own sww format and also consider |
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61 | #using netCDF. |
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62 | |
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63 | |
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64 | def pmesh_dict_to_marker_dict(triangles,meshdic,Vertices): |
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65 | """ Convert the pmesh dictionary (meshdic) description of boundary tags |
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66 | to a dictionary of markers, indexed with volume id and face number. |
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67 | """ |
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68 | sides = calc_sides(triangles) |
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69 | marker_dict = {} |
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70 | for seg, marker in map(None,meshdic['generatedsegmentlist'], |
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71 | meshdic['generatedsegmentmarkerlist']): |
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72 | v1 = seg[0] |
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73 | v2 = seg[1] |
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74 | for key in [(v1,v2),(v2,v1)]: |
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75 | if sides.has_key(key): |
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76 | #this creates a dict of lists of faces, indexed by marker |
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77 | #tagged_edges.setdefault(marker,[]).append(sides[key]) |
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78 | marker_dict[sides[key]] = marker |
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79 | return marker_dict |
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80 | |
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81 | |
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82 | def calc_sides(triangles): |
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83 | #Build dictionary mapping from sides (2-tuple of points) |
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84 | #to left hand side neighbouring triangle |
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85 | sides = {} |
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86 | for id, triangle in enumerate(triangles): |
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87 | a = triangle[0] |
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88 | b = triangle[1] |
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89 | c = triangle[2] |
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90 | sides[a,b] = (id, 2) #(id, face) |
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91 | sides[b,c] = (id, 0) #(id, face) |
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92 | sides[c,a] = (id, 1) #(id, face) |
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93 | return sides |
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94 | |
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