[432] | 1 | #!/usr/bin/env python |
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| 2 | |
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| 3 | import unittest |
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| 4 | |
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[475] | 5 | |
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[438] | 6 | from Numeric import dot, allclose, array, transpose, arange, ones, Float |
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[432] | 7 | from cg_solve import * |
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[586] | 8 | from sparse import Sparse, Sparse_CSR |
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[432] | 9 | |
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[438] | 10 | |
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[432] | 11 | class TestCase(unittest.TestCase): |
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| 12 | |
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[438] | 13 | def test_sparse_solve(self): |
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| 14 | """Small Sparse Matrix""" |
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| 15 | |
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[432] | 16 | A = [[2.0, -1.0, 0.0, 0.0 ], |
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| 17 | [-1.0, 2.0, -1.0, 0.0], |
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| 18 | [0.0, -1.0, 2.0, -1.0], |
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| 19 | [0.0,0.0, -1.0, 2.0]] |
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| 20 | |
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[475] | 21 | A = Sparse(A) |
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[435] | 22 | |
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[432] | 23 | xe = [0.0, 1.0, 2.0, 3.0] |
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| 24 | b = A*xe |
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| 25 | x = [0.0, 0.0, 0.0, 0.0] |
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| 26 | |
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[438] | 27 | x = conjugate_gradient(A,b,x,iprint=0) |
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[432] | 28 | |
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| 29 | assert allclose(x,xe) |
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| 30 | |
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| 31 | |
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[435] | 32 | def test_solve_large(self): |
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[438] | 33 | """Standard 1d laplacian """ |
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| 34 | |
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[435] | 35 | n = 50 |
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[475] | 36 | A = Sparse(n,n) |
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| 37 | |
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[435] | 38 | for i in arange(0,n): |
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| 39 | A[i,i] = 1.0 |
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| 40 | if i > 0 : |
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| 41 | A[i,i-1] = -0.5 |
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| 42 | if i < n-1 : |
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| 43 | A[i,i+1] = -0.5 |
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| 44 | |
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| 45 | xe = ones( (n,), Float) |
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| 46 | |
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[432] | 47 | b = A*xe |
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[438] | 48 | x = conjugate_gradient(A,b,b,tol=1.0e-5,iprint=0) |
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[432] | 49 | |
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| 50 | assert allclose(x,xe) |
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| 51 | |
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[435] | 52 | def test_solve_large_2d(self): |
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[438] | 53 | """Standard 2d laplacian""" |
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| 54 | |
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| 55 | n = 20 |
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| 56 | m = 10 |
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[475] | 57 | |
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| 58 | A = Sparse(m*n, m*n) |
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| 59 | |
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[435] | 60 | for i in arange(0,n): |
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| 61 | for j in arange(0,m): |
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| 62 | I = j+m*i |
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| 63 | A[I,I] = 4.0 |
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| 64 | if i > 0 : |
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| 65 | A[I,I-m] = -1.0 |
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| 66 | if i < n-1 : |
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| 67 | A[I,I+m] = -1.0 |
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| 68 | if j > 0 : |
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| 69 | A[I,I-1] = -1.0 |
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| 70 | if j < m-1 : |
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| 71 | A[I,I+1] = -1.0 |
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| 72 | |
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| 73 | xe = ones( (n*m,), Float) |
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| 74 | |
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| 75 | b = A*xe |
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[438] | 76 | x = conjugate_gradient(A,b,b,iprint=0) |
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[435] | 77 | |
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[438] | 78 | assert allclose(x,xe) |
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[435] | 79 | |
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[586] | 80 | def test_solve_large_2d_csr_matrix(self): |
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[596] | 81 | """Standard 2d laplacian with csr format |
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| 82 | """ |
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[586] | 83 | |
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[594] | 84 | n = 100 |
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| 85 | m = 100 |
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[435] | 86 | |
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[586] | 87 | A = Sparse(m*n, m*n) |
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| 88 | |
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| 89 | for i in arange(0,n): |
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| 90 | for j in arange(0,m): |
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| 91 | I = j+m*i |
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| 92 | A[I,I] = 4.0 |
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| 93 | if i > 0 : |
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| 94 | A[I,I-m] = -1.0 |
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| 95 | if i < n-1 : |
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| 96 | A[I,I+m] = -1.0 |
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| 97 | if j > 0 : |
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| 98 | A[I,I-1] = -1.0 |
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| 99 | if j < m-1 : |
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| 100 | A[I,I+1] = -1.0 |
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| 101 | |
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| 102 | xe = ones( (n*m,), Float) |
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| 103 | |
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| 104 | # Convert to csr format |
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[596] | 105 | print 'start covert' |
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[586] | 106 | A = Sparse_CSR(A) |
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[596] | 107 | print 'finish covert' |
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[586] | 108 | b = A*xe |
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[594] | 109 | x = conjugate_gradient(A,b,b,iprint=20) |
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[586] | 110 | |
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| 111 | assert allclose(x,xe) |
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| 112 | |
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| 113 | |
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[475] | 114 | def test_solve_large_2d_with_default_guess(self): |
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| 115 | """Standard 2d laplacian using default first guess""" |
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| 116 | |
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| 117 | n = 20 |
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| 118 | m = 10 |
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| 119 | |
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| 120 | A = Sparse(m*n, m*n) |
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| 121 | |
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| 122 | for i in arange(0,n): |
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| 123 | for j in arange(0,m): |
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| 124 | I = j+m*i |
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| 125 | A[I,I] = 4.0 |
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| 126 | if i > 0 : |
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| 127 | A[I,I-m] = -1.0 |
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| 128 | if i < n-1 : |
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| 129 | A[I,I+m] = -1.0 |
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| 130 | if j > 0 : |
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| 131 | A[I,I-1] = -1.0 |
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| 132 | if j < m-1 : |
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| 133 | A[I,I+1] = -1.0 |
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| 134 | |
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| 135 | xe = ones( (n*m,), Float) |
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| 136 | |
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| 137 | b = A*xe |
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| 138 | x = conjugate_gradient(A,b) |
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| 139 | |
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| 140 | assert allclose(x,xe) |
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| 141 | |
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| 142 | |
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[438] | 143 | def test_vector_shape_error(self): |
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| 144 | """Raise VectorShapeError""" |
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| 145 | |
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| 146 | A = [[2.0, -1.0, 0.0, 0.0 ], |
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| 147 | [-1.0, 2.0, -1.0, 0.0], |
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| 148 | [0.0, -1.0, 2.0, -1.0], |
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| 149 | [0.0,0.0, -1.0, 2.0]] |
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| 150 | |
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[475] | 151 | A = Sparse(A) |
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[435] | 152 | |
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[438] | 153 | xe = [[0.0,2.0], [1.0,3.0], [2.0,4.0], [3.0,2.0]] |
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| 154 | |
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| 155 | try: |
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[475] | 156 | x = conjugate_gradient(A,xe,xe,iprint=0) |
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[438] | 157 | except: |
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| 158 | pass |
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| 159 | else: |
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| 160 | msg = 'Should have raised exception' |
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| 161 | raise msg |
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| 162 | |
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[435] | 163 | |
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[432] | 164 | #------------------------------------------------------------- |
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| 165 | if __name__ == "__main__": |
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[438] | 166 | suite = unittest.makeSuite(TestCase,'test') |
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[454] | 167 | runner = unittest.TextTestRunner() #(verbosity=2) |
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[438] | 168 | runner.run(suite) |
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[432] | 169 | |
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