[354] | 1 | #!/usr/bin/env python |
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| 2 | # |
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| 3 | """ |
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| 4 | Testing interpolate_sww, based on test_data_manageer, so there maybe code |
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| 5 | that isn't needed, eg in the setup file |
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| 6 | """ |
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| 7 | |
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| 8 | import unittest |
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| 9 | from Numeric import zeros, array, allclose, Float |
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| 10 | from util import mean |
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| 11 | |
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| 12 | from interpolate_sww import * |
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| 13 | from shallow_water import * |
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| 14 | from data_manager import * |
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| 15 | #from config import epsilon |
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| 16 | |
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[356] | 17 | |
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[354] | 18 | class dataTestCase(unittest.TestCase): |
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| 19 | def setUp(self): |
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| 20 | import time |
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| 21 | from mesh_factory import rectangular |
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| 22 | |
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| 23 | |
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| 24 | #Create basic mesh |
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| 25 | points, vertices, boundary = rectangular(2, 2) |
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| 26 | |
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| 27 | #Create shallow water domain |
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| 28 | domain = Domain(points, vertices, boundary) |
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| 29 | domain.default_order=2 |
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| 30 | |
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| 31 | |
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| 32 | #Set some field values |
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| 33 | domain.set_quantity('elevation', lambda x,y: -x) |
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| 34 | domain.set_quantity('friction', 0.03) |
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| 35 | |
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| 36 | |
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| 37 | ###################### |
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| 38 | # Boundary conditions |
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| 39 | B = Transmissive_boundary(domain) |
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| 40 | domain.set_boundary( {'left': B, 'right': B, 'top': B, 'bottom': B}) |
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| 41 | |
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| 42 | |
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| 43 | ###################### |
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| 44 | #Initial condition - with jumps |
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| 45 | |
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| 46 | |
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| 47 | bed = domain.quantities['elevation'].vertex_values |
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| 48 | level = zeros(bed.shape, Float) |
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| 49 | |
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| 50 | h = 0.3 |
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| 51 | for i in range(level.shape[0]): |
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| 52 | if i % 2 == 0: |
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| 53 | level[i,:] = bed[i,:] + h |
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| 54 | else: |
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| 55 | level[i,:] = bed[i,:] |
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| 56 | |
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| 57 | domain.set_quantity('level', level) |
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| 58 | |
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| 59 | domain.distribute_to_vertices_and_edges() |
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| 60 | |
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| 61 | |
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| 62 | self.domain = domain |
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| 63 | |
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| 64 | C = domain.get_vertex_coordinates() |
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| 65 | self.X = C[:,0:6:2].copy() |
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| 66 | self.Y = C[:,1:6:2].copy() |
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| 67 | |
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| 68 | self.F = bed |
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| 69 | |
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| 70 | |
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| 71 | def tearDown(self): |
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| 72 | pass |
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| 73 | |
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| 74 | def test_sww_DSG(self): |
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| 75 | """Not a test, rather a look at the sww format |
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| 76 | """ |
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| 77 | |
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| 78 | import time, os |
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| 79 | from Numeric import array, zeros, allclose, Float, concatenate |
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| 80 | from Scientific.IO.NetCDF import NetCDFFile |
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| 81 | |
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| 82 | self.domain.filename = 'datatest' + str(time.time()) |
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| 83 | self.domain.format = 'sww' |
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| 84 | self.domain.smooth = True |
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| 85 | self.domain.reduction = mean |
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| 86 | |
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| 87 | sww = get_dataobject(self.domain) |
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| 88 | sww.store_connectivity() |
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| 89 | sww.store_timestep('level') |
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| 90 | self.domain.time = 2. |
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| 91 | sww.store_timestep('level') |
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| 92 | |
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| 93 | #Check contents |
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| 94 | #Get NetCDF |
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| 95 | fid = NetCDFFile(sww.filename, 'r') |
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| 96 | |
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| 97 | # Get the variables |
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| 98 | x = fid.variables['x'] |
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| 99 | y = fid.variables['y'] |
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| 100 | z = fid.variables['z'] |
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| 101 | |
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| 102 | volumes = fid.variables['volumes'] |
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| 103 | time = fid.variables['time'] |
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| 104 | |
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| 105 | # 2D |
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| 106 | stage = fid.variables['stage'] |
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| 107 | |
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| 108 | X = x[:] |
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| 109 | Y = y[:] |
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| 110 | Z = z[:] |
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| 111 | V = volumes[:] |
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| 112 | T = time[:] |
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| 113 | S = stage[:,:] |
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| 114 | |
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| 115 | if False: |
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| 116 | print "****************************" |
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| 117 | print "X ",X |
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| 118 | print "****************************" |
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| 119 | print "Y ",Y |
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| 120 | print "****************************" |
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| 121 | print "Z ",Z |
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| 122 | print "****************************" |
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| 123 | print "V ",V |
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| 124 | print "****************************" |
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| 125 | print "Time ",T |
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| 126 | print "****************************" |
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| 127 | print "Stage ",S |
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| 128 | print "****************************" |
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| 129 | |
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| 130 | |
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| 131 | |
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| 132 | |
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| 133 | fid.close() |
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| 134 | |
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| 135 | #Cleanup |
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| 136 | os.remove(sww.filename) |
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| 137 | |
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| 138 | def test_interpolate_sww(self): |
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[356] | 139 | """Not reaa unit test, rather a system test for |
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[354] | 140 | """ |
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| 141 | |
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| 142 | import time, os |
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[356] | 143 | from Numeric import array, zeros, allclose, Float, concatenate, \ |
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| 144 | transpose |
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| 145 | from Scientific.IO.NetCDF import NetCDFFile |
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| 146 | import tempfile |
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| 147 | from load_mesh.loadASCII import load_xya_file |
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[354] | 148 | |
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| 149 | self.domain.filename = 'datatest' + str(time.time()) |
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| 150 | self.domain.format = 'sww' |
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| 151 | self.domain.smooth = True |
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| 152 | self.domain.reduction = mean |
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| 153 | |
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| 154 | sww = get_dataobject(self.domain) |
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| 155 | sww.store_connectivity() |
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| 156 | sww.store_timestep('level') |
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| 157 | self.domain.time = 2. |
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| 158 | sww.store_timestep('level') |
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| 159 | |
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[356] | 160 | #print "self.domain.filename",self.domain.filename |
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[631] | 161 | interp = Interpolate_sww(sww.filename, 'height') |
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[354] | 162 | |
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[356] | 163 | assert allclose(interp.time,[0.0,2.0]) |
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[631] | 164 | |
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| 165 | #answer = [ 0.15, 0.1, 0., -0.3, -0.35, -0.4, -0.7, -0.8, -0.850] |
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[356] | 166 | #print "answer",answer |
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| 167 | #print interp.stage[0] |
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[631] | 168 | #stage_t = transpose(interp.stage) |
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| 169 | #assert allclose(stage_t[0], answer) |
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| 170 | #assert allclose(stage_t[1],stage_t[0]) |
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[356] | 171 | |
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| 172 | # create an .xya file |
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| 173 | point_file = tempfile.mktemp(".xya") |
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| 174 | fd = open(point_file,'w') |
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| 175 | fd.write("# demo \n 0.0, 0.6,2.,4 \n 0.0, 0.9,4,8 \n 0.0,0.1,4.,8 \n 0.4,1.0,4.,8 \n") |
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| 176 | fd.close() |
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| 177 | |
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| 178 | interp.interpolate_xya(point_file) |
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| 179 | |
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| 180 | answer = [[0.08, 0.08], [0.02, 0.02], [0.14, 0.14], [.08,.08]] |
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| 181 | #print "answer",answer |
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[631] | 182 | assert allclose(interp.interpolated_quantity,answer) |
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[356] | 183 | |
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| 184 | # create an output .xya file |
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| 185 | point_file_out = tempfile.mktemp(".xya") |
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[628] | 186 | interp.write_depth_xya(point_file_out) |
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[356] | 187 | |
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| 188 | #check the output file |
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| 189 | xya_dict = load_xya_file(point_file_out) |
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| 190 | |
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| 191 | assert allclose(interp.point_coordinates, xya_dict['pointlist']) |
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[631] | 192 | assert allclose(interp.interpolated_quantity, |
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[356] | 193 | xya_dict['pointattributelist'] ) |
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| 194 | |
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| 195 | title = xya_dict['title'].split('\n') |
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| 196 | #print "title",title |
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| 197 | string_list = title[0].split(',') # assume a title has only one line |
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| 198 | time_list = [] |
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[359] | 199 | |
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[631] | 200 | # Try another quantity |
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| 201 | interp = Interpolate_sww(sww.filename, 'stage') |
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| 202 | interp.interpolate_xya(point_file) |
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| 203 | |
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| 204 | answer = [[0.08, 0.08], [0.02, 0.02], [0.14, 0.14], [-.32,-.32]] |
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| 205 | #print "answer",answer |
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| 206 | assert allclose(interp.interpolated_quantity,answer) |
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| 207 | |
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[359] | 208 | |
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[631] | 209 | # look at error catching |
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| 210 | try: |
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| 211 | interp = Interpolate_sww(sww.filename, 'funky!') |
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| 212 | except KeyError: |
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| 213 | pass |
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| 214 | else: |
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| 215 | self.failUnless(0==1, |
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| 216 | 'bad key did not raise an error!') |
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[356] | 217 | |
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[631] | 218 | # look at error catching |
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| 219 | try: |
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| 220 | interp = Interpolate_sww(sww.filename, 'z') |
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| 221 | except KeyError: |
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| 222 | pass |
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| 223 | else: |
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| 224 | self.failUnless(0==1, |
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| 225 | 'bad key did not raise an error!') |
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| 226 | |
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[354] | 227 | #Cleanup |
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| 228 | os.remove(sww.filename) |
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[356] | 229 | os.remove(point_file_out) |
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[457] | 230 | os.remove(point_file) |
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[354] | 231 | |
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| 232 | #------------------------------------------------------------- |
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| 233 | if __name__ == "__main__": |
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| 234 | suite = unittest.makeSuite(dataTestCase,'test') |
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| 235 | runner = unittest.TextTestRunner() |
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| 236 | runner.run(suite) |
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