"""Script for running a tsunami inundation scenario for Onslow, WA, Australia. Source data such as elevation and boundary data is assumed to be available in directories specified by project.py The output sww file is stored in project.outputtimedir The scenario is defined by a triangular mesh created from project.polygon, the elevation data and a simulated submarine landslide. Ole Nielsen and Duncan Gray, GA - 2005 and Nick Bartzis, GA - 2006 """ #-------------------------------------------------------------------------------# Import necessary modules #------------------------------------------------------------------------------- # Standard modules from os import sep from os.path import dirname, basename import time # Related major packages from anuga.pyvolution.shallow_water import Domain, Reflective_boundary, \ Dirichlet_boundary, Time_boundary, File_boundary from anuga.pyvolution.data_manager import convert_dem_from_ascii2netcdf, \ dem2pts from anuga.pyvolution.combine_pts import combine_rectangular_points_files from anuga.pyvolution.pmesh2domain import pmesh_to_domain_instance from shutil import copy from os import mkdir, access, F_OK from anuga.geospatial_data.geospatial_data import * import sys from anuga.pyvolution.util import Screen_Catcher # Application specific imports import project # Definition of file names and polygons #------------------------------------------------------------------------------- # Copy scripts to time stamped output directory and capture screen # output to file #------------------------------------------------------------------------------- # creates copy of code in output dir if dir doesn't exist if access(project.outputtimedir,F_OK) == 0 : mkdir (project.outputtimedir) copy (dirname(project.__file__) +sep+ project.__name__+'.py', project.outputtimedir + project.__name__+'.py') copy (__file__, project.outputtimedir + basename(__file__)) print 'project.outputtimedir',project.outputtimedir # normal screen output is stored in screen_output_name = project.outputtimedir + "screen_output.txt" screen_error_name = project.outputtimedir + "screen_error.txt" # used to catch screen output to file sys.stdout = Screen_Catcher(screen_output_name) sys.stderr = Screen_Catcher(screen_error_name) print 'USER: ', project.user #------------------------------------------------------------------------------- # Preparation of topographic data # # Convert ASC 2 DEM 2 PTS using source data and store result in source data # Do for coarse and fine data # Fine pts file to be clipped to area of interest #------------------------------------------------------------------------------- # filenames meshname = project.meshname+'.msh' source_dir = project.boundarydir # fine data (clipping the points file to smaller area) # creates DEM from asc data convert_dem_from_ascii2netcdf(project.onshore_dem_name, use_cache=True, verbose=True) #creates pts file from DEM dem2pts(project.onshore_dem_name, easting_min=project.eastingmin, easting_max=project.eastingmax, northing_min=project.northingmin, northing_max= project.northingmax, use_cache=True, verbose=True) print 'create G1' G1 = Geospatial_data(file_name = project.offshore_dem_name1 + '.xya') print 'create G2' G2 = Geospatial_data(file_name = project.offshore_dem_name2 + '.xya') print 'create G3' G3 = Geospatial_data(file_name = project.onshore_dem_name + '.pts') print 'create G4' G4 = Geospatial_data(file_name = project.coast_dem_name + '.xya') print 'add G1+G2+G3+G4' G = G1 + G2 + G3 + G4 print 'export G' G.export_points_file(project.combined_dem_name + '.pts') #------------------------------------------------------------------------------- # Create the triangular mesh based on overall clipping polygon with a tagged # boundary and interior regions defined in project.py along with # resolutions (maximal area of per triangle) for each polygon #------------------------------------------------------------------------------- from pmesh.mesh_interface import create_mesh_from_regions region_res = 500000 coast_res = 500 pt_hedland_res = 5000 interior_regions = [[project.poly_pt_hedland, pt_hedland_res], [project.poly_region, region_res]] print 'number of interior regions', len(interior_regions) from anuga.utilities.polygon import plot_polygons if sys.platform == 'win32': #figname = project.outputtimedir + 'pt_hedland_polys' figname = 'pt_hedland_polys_test' plot_polygons([project.polyAll,project.poly_pt_hedland,project.poly_region], figname, verbose = True) print 'start create mesh from regions' from caching import cache _ = cache(create_mesh_from_regions, project.polyAll, {'boundary_tags': {'topright': [0], 'topleft': [1], 'left': [2], 'bottom0': [3], 'bottom1': [4], 'bottom2': [5], 'bottom3': [6], 'right': [7]}, 'maximum_triangle_area': 250000, 'filename': meshname, 'interior_regions': interior_regions}, verbose = True, evaluate=True) #------------------------------------------------------------------------------- # Setup computational domain #------------------------------------------------------------------------------- domain = Domain(meshname, use_cache = False, verbose = True) print domain.statistics() print 'Number of triangles = ', len(domain) print 'The extent is ', domain.get_extent() print domain.statistics() domain.set_name(project.basename) domain.set_datadir(project.outputtimedir) domain.set_quantities_to_be_stored(['stage', 'xmomentum', 'ymomentum']) #------------------------------------------------------------------------------- # Setup initial conditions #------------------------------------------------------------------------------- tide = 0. #high #tide = 3.6 #low #tide = -3.9 domain.set_quantity('stage', tide) domain.set_quantity('friction', 0.0) print 'hi and file',project.combined_dem_name + '.pts' domain.set_quantity('elevation', filename = project.combined_dem_name + '.pts', use_cache = True, verbose = True, alpha = 0.1 ) #------------------------------------------------------------------------------- # Setup boundary conditions (all reflective) #------------------------------------------------------------------------------- print 'start ferret2sww' # skipped as results in file SU-AU_clipped is correct for all WA from anuga.pyvolution.data_manager import ferret2sww south = project.south north = project.north west = project.west east = project.east #note only need to do when an SWW file for the MOST boundary doesn't exist cache(ferret2sww, (source_dir + project.boundary_basename, source_dir + project.boundary_basename+'_'+project.basename), {'verbose': True, 'minlat': south, 'maxlat': north, 'minlon': west, 'maxlon': east, # 'origin': project.mesh_origin, 'origin': domain.geo_reference.get_origin(), 'mean_stage': tide, 'zscale': 1, #Enhance tsunami 'fail_on_NaN': False, 'inverted_bathymetry': True}, evaluate = True, verbose = True, dependencies = source_dir + project.boundary_basename + '.sww') print 'Available boundary tags', domain.get_boundary_tags() Bf = File_boundary(source_dir + project.boundary_basename + '.sww', domain, verbose = True) Br = Reflective_boundary(domain) Bd = Dirichlet_boundary([tide,0,0]) domain.set_boundary( {'topright': Bf,'topleft': Bf, 'left': Bd, 'bottom0': Bd, 'bottom1': Bd, 'bottom2': Bd, 'bottom3': Bd, 'right': Bd}) #------------------------------------------------------------------------------- # Evolve system through time #------------------------------------------------------------------------------- import time t0 = time.time() for t in domain.evolve(yieldstep = 240, finaltime = 10800): domain.write_time() domain.write_boundary_statistics(tags = 'topright') for t in domain.evolve(yieldstep = 120, finaltime = 16200 ,skip_initial_step = True): domain.write_time() domain.write_boundary_statistics(tags = 'topright') for t in domain.evolve(yieldstep = 60, finaltime = 21600 ,skip_initial_step = True): domain.write_time() domain.write_boundary_statistics(tags = 'topright') for t in domain.evolve(yieldstep = 120, finaltime = 27000 ,skip_initial_step = True): domain.write_time() domain.write_boundary_statistics(tags = 'topright') for t in domain.evolve(yieldstep = 240, finaltime = 36000 ,skip_initial_step = True): domain.write_time() domain.write_boundary_statistics(tags = 'topright') print 'That took %.2f seconds' %(time.time()-t0) print 'finished'