2012-06-16 18:40:11,713 INFO anuga.utilities.log:0 |Logfile is './anuga.log' with logging level of INFO, console logging level is CRITICAL 2012-06-16 18:40:11,715 INFO polygon:959 |-------------------------------------------------------------------------------- 2012-06-16 18:40:11,716 INFO polygon:960 |Polygon Max triangle area (m^2) Total area (km^2) Estimated #triangles 2012-06-16 18:40:11,716 INFO polygon:962 |-------------------------------------------------------------------------------- 2012-06-16 18:40:11,716 INFO polygon:976 |Interior 100 56.48 564762 2012-06-16 18:40:11,716 INFO polygon:976 |Interior 2 0.92 462151 2012-06-16 18:40:11,717 INFO polygon:976 |Interior 50 0.87 17379 2012-06-16 18:40:11,717 INFO polygon:976 |Interior 50 0.68 13539 2012-06-16 18:40:11,717 INFO polygon:984 |Bounding 10000 350.52 35052 2012-06-16 18:40:11,717 INFO polygon:989 |Estimated total number of triangles: 1561264 2012-06-16 18:40:11,718 INFO polygon:990 |Note: This is generally about 20% less than the final amount 2012-06-17 00:05:23,887 CRITICAL generic_boundary_conditions:347 |Find midpoint coordinates of entire boundary 2012-06-17 00:05:23,899 CRITICAL generic_boundary_conditions:370 |Initialise file_function 2012-06-17 00:05:23,925 CRITICAL caching:840 |Caching: looking for cached files /short/w85/Shane/.python_cache/_file_function[-2040490591447378636]_{Result,Args,Admin}.z 2012-06-17 00:05:23,926 CRITICAL caching:846 |Caching: Dependencies are ['/home/547/sfm547/Busselton/anuga/boundaries/CutDownWorst.sts'] 2012-06-17 00:05:24,831 CRITICAL caching:2355|+---------------------------------------------------------- | Sun Jun 17 00:05:24 2012. Caching statistics (retrieving) +---------------------------------------------------------- 2012-06-17 00:05:24,831 CRITICAL caching:2281|| Function: _file_function 2012-06-17 00:05:24,831 CRITICAL caching:2300|| Argument: '/home/547/sfm547/Busselton/anuga/boundaries/CutDownWorst.sts' 2012-06-17 00:05:24,832 CRITICAL caching:2312|| Keyword Args: {'time_limit': None, 'interpolation_points': Array: (818, 2), 'verbose': True, 'domain_starttime': 0, 'boundary_polygon': [[341959.0512, 6275285.8377], [342041.1345, 6275472.1083], [342135.1748, 6275652.6401], [342240.3439, 6275826.9273], [342355.654, 6275994.6822], [342480.0382, 6276155.8293], [342... 2012-06-17 00:05:24,832 CRITICAL caching:2202|| CPU time: 1.35 seconds 2012-06-17 00:05:24,832 CRITICAL caching:2204|| Loading time: 0.85 seconds 2012-06-17 00:05:24,833 CRITICAL caching:2206|| Time saved: 0.5 seconds 2012-06-17 00:05:24,833 CRITICAL caching:2223|| 2012-06-17 00:05:24,833 CRITICAL caching:2224|| Caching dir: /short/w85/Shane/.python_cache/ 2012-06-17 00:05:24,834 CRITICAL caching:2237|| Result file: _file_function[-2040490591447378636]_Result(3864211 bytes) 2012-06-17 00:05:24,834 CRITICAL caching:2237|| Args file: _file_function[-2040490591447378636]_Args(15941 bytes) 2012-06-17 00:05:24,835 CRITICAL caching:2237|| Admin file: _file_function[-2040490591447378636]_Admin(639 bytes) 2012-06-17 00:05:24,835 CRITICAL caching:2239|| 2012-06-17 00:05:24,835 CRITICAL caching:2241|| Dependencies: 2012-06-17 00:05:24,835 CRITICAL caching:2266|| /home/547/sfm547/Busselton/anuga/boundaries/CutDownWorst.sts: Tue Jun 5 13:44:52 2012 474684 bytes 2012-06-17 00:05:24,836 CRITICAL caching:2368|+---------------------------------------------------------- 197, 6276738.4145], [343202.7... 2012-06-16 18:40:12,074 CRITICAL caching:2312|| Keyword Args: {'poly_geo_reference': (zone=50 easting=0.000000, northing=0.000000), 'minimum_triangle_angle': 28.0, 'mesh_filename': '/short/w85/Shane/Output/BP8Hydro/final_BP8Hydro_sfm547_np8/Busselton.msh', 'interior_regions': [[[[343759.7913, 6275660.9644], [347278.7567, 6276904.5086], [350400.8463, 6278412.63... 2012-06-16 18:40:12,074 CRITICAL caching:2334|| Reason: Arguments have changed 2012-06-16 18:40:12,074 CRITICAL caching:2368|+-------------------------------------------------------------------------- 2012-06-16 18:40:12,347 INFO mesh_interface:90 |Resource usage: memory=480.1MB resident=31.1MB stacksize=0.3MB 2012-06-16 18:40:12,348 INFO mesh_interface:90 |#@# sys_platform, linux2 2012-06-16 18:40:12,348 INFO mesh_interface:90 |#@# start_memory, 480.1171875 2012-06-16 18:40:12,348 INFO mesh_interface:90 |#@# start_resident, 31.09375 2012-06-16 18:40:12,349 INFO mesh_interface:90 |#@# start_stacksize, 0.26171875 2012-06-16 18:40:12,349 INFO mesh_interface:91 |#@# maximum_triangle_area, 10000 2012-06-16 18:40:12,349 INFO mesh_interface:92 |#@# minimum_triangle_angle, 28.0 2012-06-16 18:40:12,351 INFO mesh_interface:93 |#@# startMesh, '2012-06-16 18:40:12' 2012-06-16 18:40:12,417 CRITICAL mesh_interface:355 |Generating mesh to file '/short/w85/Shane/Output/BP8Hydro/final_BP8Hydro_sfm547_np8/Busselton.msh' 2012-06-16 18:40:21,041 CRITICAL geo_reference:168 |WARNING: Datum of D_GDA_1194 specified. 2012-06-16 18:40:21,042 CRITICAL geo_reference:169 |Default Datum is wgs84. 2012-06-16 18:40:21,042 CRITICAL geo_reference:170 |ANUGA does not correct for differences in datums. 2012-06-16 18:41:25,400 CRITICAL general_mesh:84 |General_mesh: Building basic mesh structure in ANUGA domain 2012-06-16 18:41:25,401 INFO general_mesh:86 |#@# numTriangles, 1636724 2012-06-16 18:41:37,533 CRITICAL general_mesh:136 |General_mesh: Computing areas, normals and edgelengths 2012-06-16 18:41:37,636 CRITICAL general_mesh:140 |(0/1636724) 2012-06-16 18:41:52,559 CRITICAL general_mesh:140 |(163673/1636724) 2012-06-16 18:42:07,511 CRITICAL general_mesh:140 |(327346/1636724) 2012-06-16 18:42:22,467 CRITICAL general_mesh:140 |(491019/1636724) 2012-06-16 18:42:37,383 CRITICAL general_mesh:140 |(654692/1636724) 2012-06-16 18:42:52,271 CRITICAL general_mesh:140 |(818365/1636724) 2012-06-16 18:43:07,151 CRITICAL general_mesh:140 |(982038/1636724) 2012-06-16 18:43:22,068 CRITICAL general_mesh:140 |(1145711/1636724) 2012-06-16 18:43:36,994 CRITICAL general_mesh:140 |(1309384/1636724) 2012-06-16 18:43:51,968 CRITICAL general_mesh:140 |(1473057/1636724) 2012-06-16 18:44:06,999 CRITICAL general_mesh:199 |Building inverted triangle structure 2012-06-16 18:44:52,724 INFO general_mesh:202 |#@# aoi, '195128886.481' 2012-06-16 18:44:52,725 CRITICAL neighbour_mesh:89 |Initialising mesh 2012-06-16 18:44:52,786 CRITICAL neighbour_mesh:109 |Mesh: Computing centroids and radii 2012-06-16 18:44:52,893 CRITICAL neighbour_mesh:111 |(0/1636724) 2012-06-16 18:45:05,019 CRITICAL neighbour_mesh:111 |(163673/1636724) 2012-06-16 18:45:17,165 CRITICAL neighbour_mesh:111 |(327346/1636724) 2012-06-16 18:45:29,301 CRITICAL neighbour_mesh:111 |(491019/1636724) 2012-06-16 18:45:41,427 CRITICAL neighbour_mesh:111 |(654692/1636724) 2012-06-16 18:45:53,556 CRITICAL neighbour_mesh:111 |(818365/1636724) 2012-06-16 18:46:05,677 CRITICAL neighbour_mesh:111 |(982038/1636724) 2012-06-16 18:46:17,776 CRITICAL neighbour_mesh:111 |(1145711/1636724) 2012-06-16 18:46:29,880 CRITICAL neighbour_mesh:111 |(1309384/1636724) 2012-06-16 18:46:41,984 CRITICAL neighbour_mesh:111 |(1473057/1636724) 2012-06-16 18:46:54,147 CRITICAL neighbour_mesh:164 |Mesh: Building neigbour structure 2012-06-16 18:48:38,891 CRITICAL neighbour_mesh:168 |Mesh: Building surrogate neigbour structure 2012-06-16 18:48:45,461 CRITICAL neighbour_mesh:172 |Mesh: Building boundary dictionary 2012-06-16 18:48:49,947 CRITICAL neighbour_mesh:179 |Mesh: Building tagged elements dictionary 2012-06-16 18:48:50,815 CRITICAL neighbour_mesh:195 |Mesh: Done 2012-06-16 18:48:50,815 INFO neighbour_mesh:196 |#@# finishMesh, '2012-06-16 18:48:50' 2012-06-16 18:48:50,815 INFO neighbour_mesh:197 |Resource usage: memory=2130.0MB resident=1671.6MB stacksize=0.3MB 2012-06-16 18:48:50,816 INFO neighbour_mesh:197 |#@# sys_platform, linux2 2012-06-16 18:48:50,816 INFO neighbour_mesh:197 |#@# finishMesh_memory, 2130.02734375 2012-06-16 18:48:50,816 INFO neighbour_mesh:197 |#@# finishMesh_resident, 1671.578125 2012-06-16 18:48:50,817 INFO neighbour_mesh:197 |#@# finishMesh_stacksize, 0.26171875 2012-06-16 18:48:50,817 CRITICAL generic_domain:126 |Initialising Domain 2012-06-16 18:49:25,503 CRITICAL generic_domain:191 |Domain: Set up communication buffers (parallel) 2012-06-16 19:00:44,007 CRITICAL generic_domain:304 |Domain: Initialising quantity values 2012-06-16 19:00:44,007 CRITICAL generic_domain:307 |Domain: Done 2012-06-16 19:00:51,025 CRITICAL caching:2355|+------------------------------------------------------- | Sat Jun 16 19:00:51 2012. Caching statistics (storing) +------------------------------------------------------- 2012-06-16 19:00:51,026 CRITICAL caching:2281|| Function: _create_domain_from_regions 2012-06-16 19:00:51,026 CRITICAL caching:2303|| Arguments: ([[341959.0512, 6275285.8377], [342041.1345, 6275472.1083], [342135.1748, 6275652.6401], [342240.3439, 6275826.9273], [342355.654, 6275994.6822], [342480.0382, 6276155.8293], [342612.4224, 6276310.4767], [342751.7791, 6276458.8768], [342897.1613, 6276601.3837], [343047.7197, 6276738.4145], [343202.7... 2012-06-16 19:00:51,026 CRITICAL caching:2312|| Keyword Args: {'poly_geo_reference': (zone=50 easting=0.000000, northing=0.000000), 'minimum_triangle_angle': 28.0, 'mesh_filename': '/short/w85/Shane/Output/BP8Hydro/final_BP8Hydro_sfm547_np8/Busselton.msh', 'interior_regions': [[[[343759.7913, 6275660.9644], [347278.7567, 6276904.5086], [350400.8463, 6278412.63... 2012-06-16 19:00:51,027 CRITICAL caching:2334|| Reason: Arguments have changed 2012-06-16 19:00:51,027 CRITICAL caching:2171|| CPU time: 1238.68 seconds 2012-06-16 19:00:58,533 CRITICAL caching:2184|| Loading time: 7.34 seconds (estimated) 2012-06-16 19:00:58,533 CRITICAL caching:2223|| 2012-06-16 19:00:58,533 CRITICAL caching:2224|| Caching dir: /short/w85/Shane/.python_cache/ 2012-06-16 19:00:58,534 CRITICAL caching:2237|| Result file: _create_domain_from_regions[7336535750887795753]xxxxxx_Result(2343864481 bytes) 2012-06-16 19:00:58,535 CRITICAL caching:2237|| Args file: _create_domain_from_regions[7336535750887795753]xxxxxx_Args(4638 bytes) 2012-06-16 19:00:58,535 CRITICAL caching:2237|| Admin file: _create_domain_from_regions[7336535750887795753]xxxxxx_Admin(570 bytes) 2012-06-16 19:00:58,536 CRITICAL caching:2239|| 2012-06-16 19:00:58,536 CRITICAL caching:2268|| No dependencies 2012-06-16 19:00:58,536 CRITICAL caching:2368|+------------------------------------------------------- 2012-06-16 19:00:58,556 CRITICAL general_fit_interpolate:101 |FitInterpolate: Building quad tree 2012-06-16 19:08:25,233 CRITICAL fit:109 |Building smoothing matrix 2012-06-16 19:17:18,704 CRITICAL geospatial_data:171 |Geospatial data created from file: /home/547/sfm547/Busselton/anuga/topographies/Busselton_combined_elevation.pts 2012-06-16 19:17:18,705 CRITICAL geospatial_data:173 |Data will be loaded blockwise on demand 2012-06-16 19:17:18,712 CRITICAL geospatial_data:1041|Got 1 variables: ['z'] 2012-06-16 19:17:18,713 CRITICAL geospatial_data:710 |Reading 3125022 points (in ~6250 blocks) from file /home/547/sfm547/Busselton/anuga/topographies/Busselton_combined_elevation.pts. 2012-06-16 19:17:18,713 CRITICAL geospatial_data:712 |Each block consists of 500 data points 2012-06-16 19:17:18,713 CRITICAL geospatial_data:745 |Reading block 0 (points 0 to 500) out of 6250 2012-06-16 19:17:18,721 CRITICAL fit:340 |Processing Block 0 2012-06-16 19:17:33,324 CRITICAL fit:340 |Processing Block 200 2012-06-16 19:17:47,884 CRITICAL fit:340 |Processing Block 400 2012-06-16 19:18:02,487 CRITICAL fit:340 |Processing Block 600 2012-06-16 19:18:04,292 CRITICAL geospatial_data:745 |Reading block 625 (points 312500 to 313000) out of 6250 2012-06-16 19:18:17,000 CRITICAL fit:340 |Processing Block 800 2012-06-16 19:18:31,523 CRITICAL fit:340 |Processing Block 1000 2012-06-16 19:18:45,857 CRITICAL fit:340 |Processing Block 1200 2012-06-16 19:18:49,278 CRITICAL geospatial_data:745 |Reading block 1250 (points 625000 to 625500) out of 6250 2012-06-16 19:18:56,335 CRITICAL fit:340 |Processing Block 1400 2012-06-16 19:18:56,439 CRITICAL fit:340 |Processing Block 1600 2012-06-16 19:18:56,704 CRITICAL fit:340 |Processing Block 1800 2012-06-16 19:18:58,136 CRITICAL geospatial_data:745 |Reading block 1875 (points 937500 to 938000) out of 6250 2012-06-16 19:19:01,939 CRITICAL fit:340 |Processing Block 2000 2012-06-16 19:19:25,579 CRITICAL fit:340 |Processing Block 2200 2012-06-16 19:20:16,667 CRITICAL fit:340 |Processing Block 2400 2012-06-16 19:20:32,395 CRITICAL geospatial_data:745 |Reading block 2500 (points 1250000 to 1250500) out of 6250 2012-06-16 19:20:54,338 CRITICAL fit:340 |Processing Block 2600 2012-06-16 19:21:24,595 CRITICAL fit:340 |Processing Block 2800 2012-06-16 19:22:02,532 CRITICAL fit:340 |Processing Block 3000 2012-06-16 19:22:27,095 CRITICAL geospatial_data:745 |Reading block 3125 (points 1562500 to 1563000) out of 6250 2012-06-16 19:22:40,495 CRITICAL fit:340 |Processing Block 3200 2012-06-16 19:23:18,606 CRITICAL fit:340 |Processing Block 3400 2012-06-16 19:23:57,049 CRITICAL fit:340 |Processing Block 3600 2012-06-16 19:24:24,202 CRITICAL geospatial_data:745 |Reading block 3750 (points 1875000 to 1875500) out of 6250 2012-06-16 19:24:28,662 CRITICAL fit:340 |Processing Block 3800 2012-06-16 19:25:07,103 CRITICAL fit:340 |Processing Block 4000 2012-06-16 19:25:45,975 CRITICAL fit:340 |Processing Block 4200 2012-06-16 19:26:22,584 CRITICAL geospatial_data:745 |Reading block 4375 (points 2187500 to 2188000) out of 6250 2012-06-16 19:26:24,803 CRITICAL fit:340 |Processing Block 4400 2012-06-16 19:26:55,247 CRITICAL fit:340 |Processing Block 4600 2012-06-16 19:27:09,793 CRITICAL fit:340 |Processing Block 4800 2012-06-16 19:27:24,349 CRITICAL geospatial_data:745 |Reading block 5000 (points 2500000 to 2500500) out of 6250 2012-06-16 19:27:24,350 CRITICAL fit:340 |Processing Block 5000 2012-06-16 19:27:38,931 CRITICAL fit:340 |Processing Block 5200 2012-06-16 19:27:53,449 CRITICAL fit:340 |Processing Block 5400 2012-06-16 19:28:07,998 CRITICAL fit:340 |Processing Block 5600 2012-06-16 19:28:09,809 CRITICAL geospatial_data:745 |Reading block 5625 (points 2812500 to 2813000) out of 6250 2012-06-16 19:28:22,507 CRITICAL fit:340 |Processing Block 5800 2012-06-16 19:28:44,100 CRITICAL fit:340 |Processing Block 6000 2012-06-16 19:28:58,430 CRITICAL fit:340 |Processing Block 6200 2012-06-16 19:29:01,886 CRITICAL fit:368 |Warning: no data points in fit 2012-06-16 19:48:51,981 CRITICAL quantity:897 |Applying fitted data to domain 2012-06-17 00:07:12,159 CRITICAL generic_boundary_conditions:347 |Find midpoint coordinates of entire boundary 2012-06-17 00:07:12,233 CRITICAL generic_boundary_conditions:370 |Initialise file_function 2012-06-17 00:07:12,260 CRITICAL caching:840 |Caching: looking for cached files /short/w85/Shane/.python_cache/_file_function[-4523447770796000684]_{Result,Args,Admin}.z 2012-06-17 00:07:12,262 CRITICAL caching:846 |Caching: Dependencies are ['/home/547/sfm547/Busselton/anuga/boundaries/CutDownWorst.sts'] 2012-06-17 00:07:12,436 CRITICAL caching:2355|+---------------------------------------------------------- | Sun Jun 17 00:07:12 2012. Caching statistics (retrieving) +---------------------------------------------------------- 2012-06-17 00:07:12,437 CRITICAL caching:2281|| Function: _file_function 2012-06-17 00:07:12,437 CRITICAL caching:2300|| Argument: '/home/547/sfm547/Busselton/anuga/boundaries/CutDownWorst.sts' 2012-06-17 00:07:12,437 CRITICAL caching:2312|| Keyword Args: {'time_limit': None, 'interpolation_points': Array: (1346, 2), 'verbose': True, 'domain_starttime': 0, 'boundary_polygon': [[341959.0512, 6275285.8377], [342041.1345, 6275472.1083], [342135.1748, 6275652.6401], [342240.3439, 6275826.9273], [342355.654, 6275994.6822], [342480.0382, 6276155.8293], [34... 2012-06-17 00:07:12,438 CRITICAL caching:2202|| CPU time: 2.16 seconds 2012-06-17 00:07:12,438 CRITICAL caching:2204|| Loading time: 0.13 seconds 2012-06-17 00:07:12,438 CRITICAL caching:2206|| Time saved: 2.04 seconds 2012-06-17 00:07:12,439 CRITICAL caching:2223|| 2012-06-17 00:07:12,439 CRITICAL caching:2224|| Caching dir: /short/w85/Shane/.python_cache/ 2012-06-17 00:07:12,439 CRITICAL caching:2237|| Result file: _file_function[-4523447770796000684]_Result(6356371 bytes) 2012-06-17 00:07:12,440 CRITICAL caching:2237|| Args file: _file_function[-4523447770796000684]_Args(24389 bytes) 2012-06-17 00:07:12,440 CRITICAL caching:2237|| Admin file: _file_function[-4523447770796000684]_Admin(639 bytes) 2012-06-17 00:07:12,441 CRITICAL caching:2239|| 2012-06-17 00:07:12,441 CRITICAL caching:2241|| Dependencies: 2012-06-17 00:07:12,441 CRITICAL caching:2266|| /home/547/sfm547/Busselton/anuga/boundaries/CutDownWorst.sts: Tue Jun 5 13:44:52 2012 474684 bytes 2012-06-17 00:07:12,441 CRITICAL caching:2368|+----------------------------------------------------------